Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3874 ATGGTTCCTTCTCTGTGCTTAACACCTCGAAGCTCCCCAACACTAGGTCACCCCCAACAACTAGAAACCCACAAAAAACAAAAGCATTGCATCAGAGTGAATCGTTTGTTTCAAGGCCCTCCCACTGATAAATTTAGCTTCCTCACTGCAAAGGCTGCCAATGGCAACCAACAAAATACAAAACCCAACAGTGTCATTTGTGCTGATTGTGATGGAAATGGAGCTGTTGTCTGCTCTCAATGCAAAGGTAATGGGGTGAATTCTGTTGATATTTTCAACGGACAGTTTAAAGCTGGTGACTCTTGTTGGCTTTGCGGAGGCAGGAAGGAGATGCTATGTGGGAATTGCAATGGAGCTGGCTTTATTGGTGGCTTCTTAAGCACTTATGATCAGTAG 396 0.4444 MVPSLCLTPRSSPTLGHPQQLETHKKQKHCIRVNRLFQGPPTDKFSFLTAKAANGNQQNTKPNSVICADCDGNGAVVCSQCKGNGVNSVDIFNGQFKAGDSCWLCGGRKEMLCGNCNGAGFIGGFLSTYDQ* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3874 131 PANTHER PROTEIN BUNDLE SHEATH DEFECTIVE 2, CHLOROPLASTIC 5 125 - -
Lja1g3874 131 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 5 125 - -
Lja1g3874 131 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 61 122 IPR036410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3874 Lja-Chr1 48874618 48876649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3874 - - cam:101494181 190.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3874 1 48874618 48876649 Lja1g3874 1 48874618 48876649 ECH