Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3870 ATGGGGAAAGGTGGATCTCTAAGCGACGGCGTAGTGAAGAAGATCGTCCTCTCCTACACCTACGTAGCCATATGGATCTTCCTCTCCTTCACCGTAATCGTCTACAACAAATACATCCTCGACAAGAAGATGTACAATTGGCCATTCCCAATCTCCCTCACCATGATCCACATGTCCTTCTGCGCCTCCCTCGCCTTCTTCCTCGTCCGCGTCCTCCGCCTCGTCGAACCCGTCTCCATGTCTCGCGACGTCTACCTCTCCTCCGTCGTCCCCATCGGCGCTCTCTACTCCCTCTCCCTCTGGCTCTCCAACTCCGCCTACATCTACCTCTCCGTCTCCTTCATCCAAATGCTCAAAGCCCTCATGCCCGTCGCTGTTTACTCCATCGGCGTCCTCCTCCGCAAAGAATCCTACAAAAACGACACCATGTGTAACATGCTCTCCATCTCCGCCGGCGTCGCCGTCGCCGCCTACGGCGAAGCCCGTTTCGATACATGGGGTGTCCTCCTCCAGCTCGGCGCCGTCGCGTTTGAAGCCACCAGGCTTGTCCTCATCCAAATCCTCCTCACCTCCAAAGGGATCTCGCTCAACCCCATCACATCACTCTACTACGTCGCTCCCTGCTGCTTGGTCTTCCTCTCTGTGCCATGGATCTTCGTTGAATACCCTGTTCTGAAAGAAACCTCGAGCTTCCATTTCGATTTCGTCATCTTCGGTACCAATTCGCTCTGCGCTTTTGCGTTGAATCTGGCGGTGTTTCTTCTGGTTGGGAAAACTTCTGCTCTGACGATGAATGTGGCTGGGGTTGTGAAGGATTGGCTGTTGATCGCGTTCTCTTGGTCTGTCATCAAGGATACTGTGACACCCATCAATTTGTTTGGGTATGGGCTTGCTTTTCTGGGTGTGGCGTATTACAATCATTCCAAGTTGCAGGCTATGAAGGCCAAGGAATCGCAGAAGAAAATTGCACAGGCTGATGATGAGGAATCAGGAAGGTTGCTTGAGAACAACAGAGATGGTGAAGGCAAGAGGAATGAGCAGCAGAATTGA 1050 0.5276 MGKGGSLSDGVVKKIVLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCASLAFFLVRVLRLVEPVSMSRDVYLSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLRKESYKNDTMCNMLSISAGVAVAAYGEARFDTWGVLLQLGAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLVFLSVPWIFVEYPVLKETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQAMKAKESQKKIAQADDEESGRLLENNRDGEGKRNEQQN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3870 349 MobiDBLite consensus disorder prediction 321 349 - -
Lja1g3870 349 Pfam Triose-phosphate Transporter family 20 306 IPR004853 -
Lja1g3870 349 PANTHER NUCLEOTIDE/SUGAR TRANSPORTER FAMILY PROTEIN 1 339 - -
Lja1g3870 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 64 160 - -
Lja1g3870 349 PANTHER SOLUTE CARRIER FAMILY 35 1 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3870 Lja-Chr1 48782680 48784204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3870 1 349 Organic Solute Cotransporters AT4G32390 84.571 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3870 - - gmx:100809504 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3870 1 48782680 48784204 Lja1g3870 1 48782680 48784204 ECH