Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3862 ATGAGCTACCACAACTCCTCAATGAGTTCTGGTAGTGGAAATGCTAGAAGGATATTGGAGTTTGGAAGGACTCATGTGGTTAGACCTAAAGGGAAGCACCAGGCAACTATAGTTTGGTTACATGGCCTTGGTGATAATGGCTCTAGCTGGTCCCAACTCTTGGACACTCTTCCTCTTCCAAATATTAAATGGATTTGCCCAACTGCTCCTACTCGGCCTCTAGCCTTATACGGTGGATTTTCTTGCACTGCTTGGTTTAATGTTGAGGAGATTTCAGCTGATGCTCTAAATGATTTGGAGGGTTTAGATGCTTCTGCAGCACACGTTGCCAATCTTTTATCAACAGAGCCTCCAAATATCAAACTTGGTATTGGAGGCTTCAGCATGGGTGCTGCTACTGCACTTCACTCAGCAACATGCCATGTTTTGGGGCACTATGGGAATGGAAACATTTACCCTATCAACTTATGTGCAGTTGTTTCTTTAAGTGGCTGGCTTCCTTGTTCAAGGACCTTGAAAAGCCGGATTGAAGGATCCCGTGATGGCATAAGGCGTGCAGCCTCAATGCCCTTATTTCTCTGTCATGGAATAGGTGATGATGTGGTTGCATATGAACACGGAGAGAATTCTGCAAGGACCTTAAGCTTAGCTGGATTCCAGAATCTTACATTTAGGAGCTACAATGGGTTGGGTCACTATACAATCCCTGAAGAAACTGATGAAGTTTGCAGGTGGCTAACTGGACAATTGGGACTTGAGGGGTTCAGATTGAACTAG 777 0.4479 MSYHNSSMSSGSGNARRILEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLDTLPLPNIKWICPTAPTRPLALYGGFSCTAWFNVEEISADALNDLEGLDASAAHVANLLSTEPPNIKLGIGGFSMGAATALHSATCHVLGHYGNGNIYPINLCAVVSLSGWLPCSRTLKSRIEGSRDGIRRAASMPLFLCHGIGDDVVAYEHGENSARTLSLAGFQNLTFRSYNGLGHYTIPEETDEVCRWLTGQLGLEGFRLN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3862 258 Pfam Phospholipase/Carboxylesterase 25 243 IPR003140 GO:0016787
Lja1g3862 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Lja1g3862 258 SUPERFAMILY alpha/beta-Hydrolases 25 249 IPR029058 -
Lja1g3862 258 Gene3D alpha/beta hydrolase 12 251 IPR029058 -
Lja1g3862 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3862 Lja-Chr1 48732388 48737216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3862 1 254 Acyl Lipid Metabolism Gene Families AT5G20060 64.314 1.22e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3862 K06130 - gmx:100811642 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3862 1 48732388 48737216 Lja1g3862 1 48732388 48737216 ECH