Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3858 ATGAGATTCAAGAAGGGAAGTAAGGTGGAGATCCTAGGCAAAAACGAAGGGCTTCCTGTGGAATGGCGTTGTGCTCGAATTATTTCTGGTAATGGGCGCACTTACAGTATCCAGTATGACTGTTCTAGCATGACAAGTGAGGAGGCCAGTGTTGATAGGGTTCAAAGGAAGGCCATCAGACCATGCCCCCCTCTTATTCAAGGCACTGGGAGCTGGAAATCTAATGATTTTGCGGAGGTTTATGATGCTGGTTCATGGAGAGCTGCTACTGTTTTGAAGTCCATAGGTCAAGACTTTTACTTGGTTAGGTTGTGGTTGTCTTGCAAGGAGTTTAAGGTGCACAAAGTTGACATGAGGATACGCCAATTTTGGCAAGATGATCAATGGACCCAAGGGATCCTTAACCCAGTGGCCCTAGGTGAATCTGCAGCAGGGAAGACTAGGCGGAATTTGATTTCAAACAACTATACGGTGATGCCTGAAGTGCAACAAGCTAGAAATTCTTGTTTACCAGGATCAGATGCCAGTGATCTCCTGGAGCCTCATCTAACCCCAACAGTGAAGAGAGTGTTCCCTTATGGCTCCTCTCTTGCTGAGGATTATCCCAGGAAAAGGAGGCTTGTTGTCAATATGGGTGAGTGTGACAGAATCAGAGCACCAACCACAGCCCCATTGCTGGAAAAGGTAGATGCTATTGCTTACCCACAAAATAATATGGGTGAAAAATACTTGCATTCTTCCTTTACTCATAATATCAAACAATATTATGAAATTAGGGAGGACACTCTTTTTGAAAGAATTGAAGAACCAGATTACTCTTGTGGTGGTCTGAGTTCAGTTGGCAGTTGTAGTGTGACAAGTTGTAGTTCAAATAAATTTTTCAGTGATACATTAGCAGGTCCTTCCCAGTATGAAGATGAACTTTGTAGTGATGCGGAATCTGTAGATGTTGGAAATGTGGATGGGGACAAAGGATGCACCGATTCTCCGAAAGAGGTTGTACCCGAAAGAATTCATAGGGCCAGGGTAGGAGGCTTGCTTGCCTTGCTTCCAATGGCTAAATACAATGGCTAG 1074 0.4423 MRFKKGSKVEILGKNEGLPVEWRCARIISGNGRTYSIQYDCSSMTSEEASVDRVQRKAIRPCPPLIQGTGSWKSNDFAEVYDAGSWRAATVLKSIGQDFYLVRLWLSCKEFKVHKVDMRIRQFWQDDQWTQGILNPVALGESAAGKTRRNLISNNYTVMPEVQQARNSCLPGSDASDLLEPHLTPTVKRVFPYGSSLAEDYPRKRRLVVNMGECDRIRAPTTAPLLEKVDAIAYPQNNMGEKYLHSSFTHNIKQYYEIREDTLFERIEEPDYSCGGLSSVGSCSVTSCSSNKFFSDTLAGPSQYEDELCSDAESVDVGNVDGDKGCTDSPKEVVPERIHRARVGGLLALLPMAKYNG* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3858 357 Pfam Agenet domain 6 64 IPR008395 -
Lja1g3858 357 SMART agenet_At_2 70 126 IPR014002 -
Lja1g3858 357 SMART agenet_At_2 1 67 IPR014002 -
Lja1g3858 357 PANTHER PLANT TUDOR-LIKE RNA-BINDING PROTEIN-RELATED 1 260 - -
Lja1g3858 357 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 1 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3858 Lja-Chr1 48714268 48716280 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3858 - - gmx:100800837 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3858 1 48714268 48716280 Lja1g3858 1 48714268 48716280 ECH