Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3838 ATGGGAGAGCAAAAGAGAGGAGAAGAAAGGGGAATGGGTAATGAGAGCGAGATGATCCCATGTCTGGATTTTTGTAGGGGTCGACTGCCATTAGCAGAAAGGGGTGATGAGTGGAAAAATATGAGCAAGAAAGTGAGAGAAGCATGTGAGAGTCATGGTTGCTTCCTATTTATGTGTGATGAAATCTCAAAGGGTGTGTGTGAAGAAATGTTCATGGGGATGAAAGCATTGTTTGATCTGCCTGAAGAAACCAAACAAAAGCACATTAGTCCTAAGCCTTATAGGAGCTATCTGAGCAAGTGTCCAGTCATTCCCCTATGTGAAAGCTTTGGGATTGATGATGCTCATCTACAAGTTATGTCTGGAGCCTTTACTGATCTCATGTGGTCTCAAGGAAACCCAACATTCTGTGAAGCAATGAAGTCCATGAGCTCAAAGTTGCTAGAACTATGTGTCATCTTCATGAAGATGATTCTGGAGGGTTATGGCCTCCCACAACATTACATTTCAGATGTTGAAAACATGACAAGCACTAGCAATTTAAGGTTGATGAAATACAAAGTTCCTGAGAAGAACTCTGAGGTTGCCCTGGTACCTCACACTGACAAAAACACCTTAACAATTCTATGCCAAAATGATGTCCAAGGTCTAGAGGTGCTCACCAAAACAGGCAAGTGGACTCAATTCAAGATACCTCAGAATGGCTTTGTGGTCTTTGTTGGAGACATTTTGAAGGCTTGGAGCAATGGAAGGATTCATGCAGCAATGCATAGAGTGGTGATGAATGGAGGAGATAAAGAGAGGTACTCTCTTGGACTTTTTGCTATGCCAAAGGATGAGATGGTCGTTGCGGTGCCTCGTGAGCTTGTGGATGATAAAATGCATCCCCTCCGTTACAAGCAATTCAAATATGGGGAGTACTTCAAGTATCATGTCTCAACTCTCAAAGAAGATGCACTTGAAGCATTTGCAGGTGTTTGA 981 0.4271 MGEQKRGEERGMGNESEMIPCLDFCRGRLPLAERGDEWKNMSKKVREACESHGCFLFMCDEISKGVCEEMFMGMKALFDLPEETKQKHISPKPYRSYLSKCPVIPLCESFGIDDAHLQVMSGAFTDLMWSQGNPTFCEAMKSMSSKLLELCVIFMKMILEGYGLPQHYISDVENMTSTSNLRLMKYKVPEKNSEVALVPHTDKNTLTILCQNDVQGLEVLTKTGKWTQFKIPQNGFVVFVGDILKAWSNGRIHAAMHRVVMNGGDKERYSLGLFAMPKDEMVVAVPRELVDDKMHPLRYKQFKYGEYFKYHVSTLKEDALEAFAGV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3838 326 SUPERFAMILY Clavaminate synthase-like 18 315 - -
Lja1g3838 326 Pfam non-haem dioxygenase in morphine synthesis N-terminal 19 97 IPR026992 -
Lja1g3838 326 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 14 325 - -
Lja1g3838 326 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE AOP1-RELATED 14 325 - -
Lja1g3838 326 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 176 277 IPR005123 -
Lja1g3838 326 Pfam 2OG-Fe(II) oxygenase superfamily 189 275 IPR044861 -
Lja1g3838 326 Gene3D - 17 324 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3838 Lja-Chr1 48466338 48469099 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3838 19 307 Glycosyltransferase AT5G59530 23.232 6.68e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3838 - - gmx:100817159 427.557