LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g3821	ATGCCGAGAATGGAGGACATTCTAAACCTTCCAGTGCAAGACCCTCCTCTTCCTGAGTTCTCTGCTGCTCATGTAAATTGGGTGAAGTTACAAGGTGGTCGCCATGGTGGTGATGATATTGCTCTGATTCCTTTTGCCAGGGTTGATGATTTTGTGAAAGGGGAATCTTCCAATCCTGAGTGTCCTGCTAGCTTCCGTGTAGAATCAAGAAGGAAGAGACCGGTAGGAAGCGTAGCTAAACCGAGGGTTGACGGTTATCTTGAGTATACACTATATTGGTGTTCTTATGGTCCTGAAGACTACCGAGAGAGTGACTTGAGTTTAGAGGATGGCACAAGCACCAAACCTGCTTCAGGGAAGGGGAGCAGGCCAGGTAGGCGTCACATGATGAGAGGCTGCCTTTGTCATTTCACGATTAAAAGACTATACACCAGACCCCTTCTTGCCCTGATCATATATAACCAAAGAAGGCATGTTGATAAATCAGGGGCACCGTGCCATGGAATGCTCGACAGGGATGCTGTAGGGACAAGAGCTATGTATGCTCCACGAATTTCAGATGAGTTACGGCAGAAAGTGATGTCTATGCTTTATGTTGGAATGTCTCTGGACAATATAATACAGCATCATGCAGAGGTGATGCAGAAGCAAGGCGGGCCACAAAACCGTGATGATTTTCTCACTCGAAATGATGTGCGCAACATGGAAAGGACTATTCGTAATTCTTCACTTGAGCTACAGGGAAATGATGAATACAGTGTAAAGACATGGGTGCAGCGTAATCAGAAGCATGTTTTTTATTTCCAAGATAACTCGGGTTCAGAATCTCTTGTTTTAGGTATTCAGACAGATTGGCAGCTGCAGCAAATGCTTCGTTATGGAAGCAATGGCTTCATTTGTTTTCATTCAAAATTTGGCTTGAAGAAGCTTAAGCACCCCGTATGCTCTTTACTTGTTTTCGATTCATCTCAAAATGCAATTCCAGTTGCTTGGATCATCGCTTCATCTTTTGTTGGTAAAGATATTCATAAGTGGATAGTATTGCTATCTGAAAGATTACGAGCCAAGGATCCCAGATGGCGGCCTAATGCTATTTTGTTGGATGATCCATCTTTTAACTATTCTATCATAAGAGAGGCCTTCCAGTGTCGCATCCTACTATGTGCCTGGCATGTTCGCCGTGCTTGGATAAAAAAACTTTTCAAGAAATGCTGCAACTTTGAGGTACAACGGGAGATGTTTAGGCACTTGGGATGGATTCTGTACTCTACGAGATGTGGACCAAATGCCATGGATGCAGTTGAAGAGCTTATGCAGATTTTTGTCGACCAGTGTGCCTTCATGGACTATTTCAAGAGTCAATGGTTACCTATTATAGATATGTGGATTAGTGGCATTAAGTCACTCCCTGCGACGACTCCTGAGCCACATGCTGCAATAGAATCCTATCACCTAAGACTAAAATCCACGCTTTTGAAGGCGAATTATGCTAATTTCTGGTCTAGAGCTGACTGGTTAATCCACACTTTAACTACTGAATTTCACTCATTATACTGGCTAGATCAGTACAGTTTAGAAACTGGTTATCTTGAGAATCTACGAGCTGACTCTTTCTCCACTAATGCTTGGTATCATGCTCTTCATATTCCAGATGTTGATGTGGTACTGGATGAGCAAAATCTCAATCTTGCCAAAGTTTTATCCCAGACTGACCGAAGCTTGGTCTACACAGTTTGGAATCCTGGTTCAGAATTTTCACTTTGTGATTGTTCCTGGTCTAGGCTGGGAAACCTGTGTAAACATGTCATCAAGGTGGCAACTTTCTGTAGAAGTCGGCAGGTTGCAAGACCATTATTGTCTGCTCAAGTTTATAAACAAGCTTTGCTCACCCTTCTCCATAATCCTCCGGATGATCCCTTAGTTCTTGATCATACCGTTCTACATGTGGCCCGTTTGCAACAAGACATTAAAGCCCTGGAAGACTTGTCAAATAGTGGATTACTCCAGCCTGTAGTCCCTGATTTAAGTTCTCAAATGGCTGATAATCCTCTGCTTTTTCAGCGCTTCCCATGA	2073	0.4322	MPRMEDILNLPVQDPPLPEFSAAHVNWVKLQGGRHGGDDIALIPFARVDDFVKGESSNPECPASFRVESRRKRPVGSVAKPRVDGYLEYTLYWCSYGPEDYRESDLSLEDGTSTKPASGKGSRPGRRHMMRGCLCHFTIKRLYTRPLLALIIYNQRRHVDKSGAPCHGMLDRDAVGTRAMYAPRISDELRQKVMSMLYVGMSLDNIIQHHAEVMQKQGGPQNRDDFLTRNDVRNMERTIRNSSLELQGNDEYSVKTWVQRNQKHVFYFQDNSGSESLVLGIQTDWQLQQMLRYGSNGFICFHSKFGLKKLKHPVCSLLVFDSSQNAIPVAWIIASSFVGKDIHKWIVLLSERLRAKDPRWRPNAILLDDPSFNYSIIREAFQCRILLCAWHVRRAWIKKLFKKCCNFEVQREMFRHLGWILYSTRCGPNAMDAVEELMQIFVDQCAFMDYFKSQWLPIIDMWISGIKSLPATTPEPHAAIESYHLRLKSTLLKANYANFWSRADWLIHTLTTEFHSLYWLDQYSLETGYLENLRADSFSTNAWYHALHIPDVDVVLDEQNLNLAKVLSQTDRSLVYTVWNPGSEFSLCDCSWSRLGNLCKHVIKVATFCRSRQVARPLLSAQVYKQALLTLLHNPPDDPLVLDHTVLHVARLQQDIKALEDLSNSGLLQPVVPDLSSQMADNPLLFQRFP*	691

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g3821	690	ProSiteProfiles	Zinc finger SWIM-type profile.	576	610	IPR007527	GO:0008270
	Lja1g3821	690	PANTHER	ZINC ION-BINDING PROTEIN	1	688	-	-
	Lja1g3821	690	MobiDBLite	consensus disorder prediction	105	126	-	-
	Lja1g3821	690	PANTHER	ZINC ION BINDING PROTEIN	1	688	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja1g3821	Lja-Chr1	48234240	48239277	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g3821	-		-	gmx:100779025	1286.17