Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3815 ATGCAGCACGGCGTAGAGGACGGTGGTAGCGGCGACGACCAAAACGCGCGTCCCGAGGAGAATCATCTGGACTCCGAGATTCTCAAGCTGCGTCAACGCTGGGAACTCGCTTCTGTTCTCAATTTCTTGGACGTGTTTAGTCCGATACTTGGTAAGGATTTGAAGCTGTCAGCTGAAGAAATTGAGATCGGCCTTGTTAAGCCTGATGCTGCGCTTTCTCGTCTTCATGTTCAACTTTTGAAGGGAATGCCACCTGTGAGTAAAACATTGGATGATTCTGATAAATGGGTGACCGTACTCTGTACGAAGCTGACAATGTGGTGGCCTTGGGTTGCTGAGGGGGAGATTCCACTTAAACAATCTAAAGGAGAGGAGATATCCAAGTACAAGGAACTTGATCCATCAGATCGTTTACTGCTGCTAAAAGCACTTTGTGAAGTTAGAGCTGACCAACACGATGCAGTGTCATACATTAATGACGCCTTAAAAGAAGGAACCCAAGTTTCTTCTTTTCGCAAAGATGCCTTAGGAAGAGATGGAGCTGGTACATCCTATTGGTATGATGCAAATTCAAAAGGTCAAAGTCACAGATTGTACAAGGAAACAATCACCATGTCAAGATCAAGCCCAAAGGCTAAGGTCAAAGGATGTTTACCACTTCCGACCATTAACTTCCATTGGGAAACACTTGCTTCCAATCTTGAGGAATTTTCAGAAGTAGCTGAAAAATTCTCATCCAGCATGTCAACTTTGGAATTTAATGTTGGCAAGAAGCTTCAAAGTGATGCCATTCCTGTTCTTGAAAAGCTTCAGAAGAAGAAAGAAAGAGCATTGAAACAGAAGCAGAGGCAGGAAATGCTTTTGAAAGATTTTCAGAAACCTTATGTTTCTGGAACTACACGATCTTGTCGCACTCGAAAGCCTATTAGTTACACATTTGAAGCTTATGATCAAACAATTAAGGAGGCAATACAGCTAACAAACAAAAGGAAGTCTCCTGGTGCTAGCCAAGATGGAAACAGAGGATCAGAAGATAAATCCAACTCAAAAGATGTTTCTTCCACAGACAGTGATTCAAAAAGCGATGTGCCCCCCTTATCCGAGAGTGATGATACTGGTTATAAAATTGAGAATCGCGGTAGCAGTGAGGAAGAGAATGACGACATTGATAGTGAGATGGGTAGGTCAGAAGCACAGACAAGCCGTGCAGTTTCTTATCCCAAGGGTGTTCGCCAGAGTGAGCGGTTAACTGGCGTCCCTAACCATTCAGTTCAAGAAAACAGAGCAAAGCAAAGACTGAGACAAAGACTAACCCGCAATTCTGCCATGGAATCTATAGTTATACCGGATTCAGAGGATGAACAAGGAGGGAAGACAGATCTCTCGGAGTCTAGTTAA 1398 0.4356 MQHGVEDGGSGDDQNARPEENHLDSEILKLRQRWELASVLNFLDVFSPILGKDLKLSAEEIEIGLVKPDAALSRLHVQLLKGMPPVSKTLDDSDKWVTVLCTKLTMWWPWVAEGEIPLKQSKGEEISKYKELDPSDRLLLLKALCEVRADQHDAVSYINDALKEGTQVSSFRKDALGRDGAGTSYWYDANSKGQSHRLYKETITMSRSSPKAKVKGCLPLPTINFHWETLASNLEEFSEVAEKFSSSMSTLEFNVGKKLQSDAIPVLEKLQKKKERALKQKQRQEMLLKDFQKPYVSGTTRSCRTRKPISYTFEAYDQTIKEAIQLTNKRKSPGASQDGNRGSEDKSNSKDVSSTDSDSKSDVPPLSESDDTGYKIENRGSSEEENDDIDSEMGRSEAQTSRAVSYPKGVRQSERLTGVPNHSVQENRAKQRLRQRLTRNSAMESIVIPDSEDEQGGKTDLSESS* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3815 465 MobiDBLite consensus disorder prediction 451 465 - -
Lja1g3815 465 PANTHER DDT DOMAIN-CONTAINING PROTEIN DDR4 27 402 - -
Lja1g3815 465 Coils Coil 267 287 - -
Lja1g3815 465 PANTHER REMODELING AND SPACING FACTOR 1 27 402 IPR028938 GO:0006355|GO:0031213
Lja1g3815 465 MobiDBLite consensus disorder prediction 343 357 - -
Lja1g3815 465 MobiDBLite consensus disorder prediction 326 465 - -
Lja1g3815 465 MobiDBLite consensus disorder prediction 326 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3815 Lja-Chr1 48108687 48113113 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3815 - - adu:107463013 559.296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3815 1 48108687 48113113 Lja1g3815 1 48108687 48113113 ECH