Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3794 ATGGCAACAAAAACTAAAGACACTAGTGCTACAGGGAAGGAGAAGAAGCCCTCATCTTCTATCCCCATCACAAGCACCAAAAAGACCACCAAGCCCTCATCCACAGCAAGCCCATCAGACAAGCCCACCTCAAGCCCATCAGACAAACAAATCCCAAACTACCTCAAGCCCACAATCAGCTCACGCCTTGAGTCCCAGTCCTTCAAGCTAGCCAGCAAGAGTGATGCTCAAAACAAAGCCACTCTCAACAGAAGAAGGTCCTTTGACAAACCACCATCACCTTCAGGCCCAAAACAAAGACAGCACACTCTTTCAAGGCAAAACAATGCCCTTGTGTCCCCTGGCCCTAGAGACAGGGTCCTAACTCGATCTTCCACCACTCTTCCAGTGAAAACCATAAACACTACCAAACCTGTTTCAGAGAGGAATTCAAAGACTTCTAAAGAAGGAAAAACTCACCCTCTGGTTGCCAAGAGTGCAAAGAAGAGCAGCCCCATTATTTTCACTCCAGCAAATAAGAAGGTAGCTGCTGCTGGTGCTTCTGCTGCTAAATCGAAGAAAACCTCAAAGACCATCACTGTTCCTGAAACCACAGAAGGGACCCATGTTGATGAACCTGAGGCAGAAGTTAAAGAAGCTGTGAATGAAGAAGAGATTGCAGAAGTAGAAAAAGTGGAGGATAAAGAACAAGAGGCTGAAAATGTACCTGAAACCCCACCTCATGTTGAATCTGAACCTGAACATGAGCATGATCAAAAAATTGAAGAGTCTGAACCTGAACATGAGCATGATCAAAAAGTTGAAGAGTCTGATCAGCCTCAAATTCAAGATGATCATGATGAGAAGGTGGTACCTACTGTGTCAGAACAAGAAGAAGAAGAAGCAAAAGAAGAGAAAATCATCAAAGATGAGCATGAAGAGGTAGAGAATACAATCCAAGAGGAAAGCAACATTGATGAGAGTCAGCCAGAAATTAATCATTCAGCCAATGAAGAAGTTGAGGTCAAAGAAAAGGAAGAAGAAGAAGAAGGTGGGGTTATAACAGAAGAAGATCATAAAAATGAGACCACCAATGAGGAAAAGACAGAGGAAGAAGAGAAGGAAGGGGTTGAATCAGGAGAAACAAGTGAAGGGGTTAAGTTAACAGAAGGAGTTGAAGAGGGTGATGAACAGAGTGAAGCTAAAGAAGAAGCTAAAGAAGAGGGTGATGAACATAGTGAAGCTAAAGAAGAAGCCGTGGCAGAGTCACCAAAGCCAAATCAACAAACAGCTTCTGTTCATGGTAAGAAAGAGTCTCAGGTATCAAATGATGTCATTGAAGAGACTGCGAGCAAACTATTGGAGGCGAGAAAGAACAAGGTGAGAGCTTTGGCTGGTGCATTTCAGACTGTTATTGATTATCAAACCAAATGA 1413 0.4324 MATKTKDTSATGKEKKPSSSIPITSTKKTTKPSSTASPSDKPTSSPSDKQIPNYLKPTISSRLESQSFKLASKSDAQNKATLNRRRSFDKPPSPSGPKQRQHTLSRQNNALVSPGPRDRVLTRSSTTLPVKTINTTKPVSERNSKTSKEGKTHPLVAKSAKKSSPIIFTPANKKVAAAGASAAKSKKTSKTITVPETTEGTHVDEPEAEVKEAVNEEEIAEVEKVEDKEQEAENVPETPPHVESEPEHEHDQKIEESEPEHEHDQKVEESDQPQIQDDHDEKVVPTVSEQEEEEAKEEKIIKDEHEEVENTIQEESNIDESQPEINHSANEEVEVKEKEEEEEGGVITEEDHKNETTNEEKTEEEEKEGVESGETSEGVKLTEGVEEGDEQSEAKEEAKEEGDEHSEAKEEAVAESPKPNQQTASVHGKKESQVSNDVIEETASKLLEARKNKVRALAGAFQTVIDYQTK* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3794 470 MobiDBLite consensus disorder prediction 200 218 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 398 414 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 14 78 - -
Lja1g3794 470 Coils Coil 347 367 - -
Lja1g3794 470 PANTHER EMB|CAB62594.1 1 469 - -
Lja1g3794 470 Coils Coil 287 308 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 225 312 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 1 161 - -
Lja1g3794 470 Pfam Plant calmodulin-binding domain 359 465 IPR012417 GO:0005516
Lja1g3794 470 MobiDBLite consensus disorder prediction 94 112 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 416 437 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 184 198 - -
Lja1g3794 470 Coils Coil 391 415 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 119 141 - -
Lja1g3794 470 PANTHER CALMODULIN-BINDING PROTEIN-LIKE PROTEIN 1 469 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 142 156 - -
Lja1g3794 470 Coils Coil 208 235 - -
Lja1g3794 470 MobiDBLite consensus disorder prediction 174 437 - -
Lja1g3794 470 SMART CaM_binding_2 353 466 IPR012417 GO:0005516
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3794 Lja-Chr1 47776653 47779534 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3794 - - lja:Lj1g3v1967330.1 679.478