Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3792 ATGGCGGTTGTGGAAGGCGACAAAGAAAGAGAGCCACTCATTCCGGGGTTACCGGATGAAGTTGCAGAGCTTTGTCTTCTTCATGTTCCTTACCCTTACCAAGCTCTAGTTCGCTCTGTTTCATCTTCATGGAACAGAGCAATCACACACCCTGCTTTCAAGAAAACTCTCTCTCGCTCATACCTATTCGTTGTTGCTGTGAATAAAGCAACCGGTAAGATTCAATGGCAGGCGCTGGACCCATCATCGGTGCGGTGGTTCGTGCTTCCTCCGATGCCGCTGAGCGACGCCGGTGGACAAACTTCCTTCGCCTGTGCATCGCTGCCGAGACAGGGGAAGCTCTTCGTGATGGGGATGAAGACCGCTGTAGTATACAGCACTGCAACAAATCAGTGGTCGGTGGCGAGTGGGGTTCCCGGCGGGAGGTCGTTTTTCGCGGCGGAGGAGGTTAACGGGAGGATTGTGGCGGTTGGTGAGCGCGGGACGGGAATCTACGACCCGGAGAAAGATAAGTGGACGAGGGGCGCTGCGCTGAGCGGGGAGCTGAAGAGGTACGAGGCGGCGGCGGTGGAGGGGAAGGTGTACGTGACGGAGGGGTGGTGCTGGCCGTTCACGCGCCGGCCGAGAGGGTGGGCGTATGATTCCGAGAGGGACACGTGGCGGGAGATGAGGGAGGGGCTGAGGGACGGGTGGACGGGGGTGAGCGTGGCGGTGGAGGGGAAGCTCTTTGTGATCCCCGAGTACGGTGACTTGCCGGTGAAGTTTTACGACGAGGGAACTGACACGTGGCGGTGTGTGGCTGGGGACAGGTTTCCTAGGGAAGCAATGCAGAGACCCTTTTGTGGGAGGGGTTTAGATGGCAAAATCTATGTGGTCTCTTCTGGTTTGAATGTGGCCATTGGGAGTGTTGTTTTTGTTAACAATGTCCCCCAACATGATAGTCACAATGACAACAACAATGGTGGACAAGGTGTTGGGGTTGAGTTGACGTGGCAGGTGGTGGAGGCGCCACCAGCTTTCCGCGAATTCTCACCTTCTAGTTGTCAGGTGTTGTATGCTTGA 1062 0.564 MAVVEGDKEREPLIPGLPDEVAELCLLHVPYPYQALVRSVSSSWNRAITHPAFKKTLSRSYLFVVAVNKATGKIQWQALDPSSVRWFVLPPMPLSDAGGQTSFACASLPRQGKLFVMGMKTAVVYSTATNQWSVASGVPGGRSFFAAEEVNGRIVAVGERGTGIYDPEKDKWTRGAALSGELKRYEAAAVEGKVYVTEGWCWPFTRRPRGWAYDSERDTWREMREGLRDGWTGVSVAVEGKLFVIPEYGDLPVKFYDEGTDTWRCVAGDRFPREAMQRPFCGRGLDGKIYVVSSGLNVAIGSVVFVNNVPQHDSHNDNNNGGQGVGVELTWQVVEAPPAFREFSPSSCQVLYA* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3792 353 SMART fbox_2 17 57 IPR001810 GO:0005515
Lja1g3792 353 PANTHER F-BOX PROTEIN AFR 6 353 - -
Lja1g3792 353 Gene3D - 48 322 IPR015915 GO:0005515
Lja1g3792 353 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 6 353 - -
Lja1g3792 353 SUPERFAMILY Kelch motif 61 296 IPR015915 GO:0005515
Lja1g3792 353 SUPERFAMILY F-box domain 12 86 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3792 Lja-Chr1 47760455 47762606 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3792 - - gmx:100802282 451.44