Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3790 ATGCACACAATGGCCTGCACTTTCCCATCGATTCGTTTCTTCACTCCCTCCAGTTCGTACCTCTCTTCCAGAGTTAGGGTTACACTAGCACATTTTCACGCAGCTTCTGTCTCGTACCGGGCGAGTGGACTCACCTCTAGCTCAATGAGTCAACCCGCCGATTCCGACACTCTTTCGACTCCGATTGAAGCACCGTCGAAGCCGGAAAACGCCGATGTTTTGGTCCAGTACGTGGTGCTCCGGCGAGACCTGATCGACACTTGGCCGCTGGGTAGCGTTGTTACTCAAGGCTGCCACGCTTCTGTTTCCGCCATTTGGTCTAGCAAAGACGATCCTCTCACCGTCGATTATTGCAGCCCTGATAAAATTGATTCTATGCACAAAGTCACACTTGAAGTGAAGGGAGAGCCCCAAATAAAAAACTTGTCTGAGAAGCTTACATCTGGTGGGATCATTCACAAACTGTGGATTGAACAACCTGAAAACTTCCCTACATGCCTCGCCACAAAACCTTACCCCAAGTCAGTTGTATCTCCGTATTTCAAGAAGTTGAAACTCTGCAAGTGA 567 0.4921 MHTMACTFPSIRFFTPSSSYLSSRVRVTLAHFHAASVSYRASGLTSSSMSQPADSDTLSTPIEAPSKPENADVLVQYVVLRRDLIDTWPLGSVVTQGCHASVSAIWSSKDDPLTVDYCSPDKIDSMHKVTLEVKGEPQIKNLSEKLTSGGIIHKLWIEQPENFPTCLATKPYPKSVVSPYFKKLKLCK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3790 188 SUPERFAMILY Peptidyl-tRNA hydrolase II 74 187 IPR023476 -
Lja1g3790 188 MobiDBLite consensus disorder prediction 45 65 - -
Lja1g3790 188 Pfam Peptidyl-tRNA hydrolase PTH2 74 187 IPR002833 GO:0004045
Lja1g3790 188 MobiDBLite consensus disorder prediction 45 64 - -
Lja1g3790 188 PANTHER PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED 44 188 IPR042237 -
Lja1g3790 188 CDD PTH2_like 74 187 - -
Lja1g3790 188 Gene3D Bit1 74 188 IPR023476 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3790 K05969 - gmx:100788281 270.396