Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3779 ATGGAGCCTCATTGCCTAATTCGAATATTTTTCTCTCTCAGTTTGATGCTGATGACAACCCATGCTGCCTTACCTCCGGAAATTTACTGGAAAATGATGCTTCCAAGTACTCCCATGCCAAAAGCAATCGTAGAGCTACTGAAGAATTCATTTTGGATTTCCTATAGTAAAGAGACTCAACTACCCAGTAACGCAAATGGTCTTGAAAATCCTGGTTCTAGTAACCATCACTTGCATGAGGTTTCATCACGCGCAAGTTTCTTCCTAGAAGATCAACTTCATTCAAGCAACAAATTTTACATGCTCTTGAATAAGATAAGATCTGCAGCCCCATTGTTGCCTCGCCAAATTACACAGCAAATACCATTCTCACTAGACAAGATGAAAGAAATATTGGAGATGCTTTCTATAAAACCCAACTCAAGGAATGCTGAGATTGTGGAGGAAACCATTGGTATTTGTGAAGCTCCTGCAATGGATGGAGAGGAAAAATACTGTGCAACTTCATTGGAATCCATGATAGATTTCGCCACTTCTAAGCTTGGCAATAACGTGCATGCTATGTCAACAAATGTGCAAAAAGAAACTAAACTACAAAATCTTTTAGTGAAAGATGGAGTAAAGAATTTAGCAGATGGTCATGTTATTGCTTGTCATCCCATGACATATCCGTATGTTGTCTTTGGTTGTCATGAATTACACAAGACCAGCGCATATTATGTGCCCCTGGAAGGAGAAGATGGGGTTAGAGTCAAAGCAGTTGCGGTATGCCACAAAGACACATCAAAATGGGATCCAAATCATGTGGCTTTTCAAGTGCTCAAAGTCAAACCTGGAACGGTTCCAGTGTGTCATTTCTTCACTGAGGGCCATGTTCTTTGGCTTTCCAAGTAG 894 0.4049 MEPHCLIRIFFSLSLMLMTTHAALPPEIYWKMMLPSTPMPKAIVELLKNSFWISYSKETQLPSNANGLENPGSSNHHLHEVSSRASFFLEDQLHSSNKFYMLLNKIRSAAPLLPRQITQQIPFSLDKMKEILEMLSIKPNSRNAEIVEETIGICEAPAMDGEEKYCATSLESMIDFATSKLGNNVHAMSTNVQKETKLQNLLVKDGVKNLADGHVIACHPMTYPYVVFGCHELHKTSAYYVPLEGEDGVRVKAVAVCHKDTSKWDPNHVAFQVLKVKPGTVPVCHFFTEGHVLWLSK* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3779 297 Pfam BURP domain 87 295 IPR004873 -
Lja1g3779 297 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 16 295 IPR044816 -
Lja1g3779 297 PANTHER BURP DOMAIN PROTEIN RD22 16 295 - -
Lja1g3779 297 SMART BURP_2 85 297 IPR004873 -
Lja1g3779 297 ProSiteProfiles BURP domain profile. 87 297 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3779 Lja-Chr1 47480520 47482823 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3779 - - lja:Lj1g3v1989440.1 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3779 1 47480520 47482823 Lja1g3779 1 47480520 47482823 ECH