Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3777 ATGGCTCCTAGATTGGATTTTTCCAACTGGGGTTTCAAGGATTCAGAGAGAGGAACACCAGTGGTAGTGAAAATGGAGAACCCCACTTTCTCTGTTGTGGAGATAAACGGTGCAGACGCTGCGTTTAGGCCAGTAGAGAAGAACCGTGGCAAGAATGCCAAGCAGGTCACATGGGTTTTGCTTCTCAAGGCTCACCGTGCTGTTGGCTGTGTCTCTTGGCTCGCCACCGTGCTGTGGGCGTTGCTCGGAGCCATTAAGAAGAGGTTGATTCATAGGGAGAGTGAGAATTTGGATAAAGGGAGGTTACTGTTTAGAGTCATTAGAATGTTCCTGGTGACTTCAATGGTTGTTCTGGGGTTTGAGGTTGTTGCTTACCTGCAAGGTTGGCATTTTGGGAATCCTAGGTTGTTGCACATTCCTCGTACCTCGGATTTGCAAGGGTTGTTCCACATGGTTTATGTTGCTTGGGTAACGTTTCGCGCCGAGTACATTGCTCCACCAATTCAGGCTCTTACCATGTTTTGTGTTGTTATGTTTCTTATCCAATCGGTGGATCGTTTGCTTCTTTGCTTGGGGTGCTTTTGGATGAAATTCAAGAAGGTTAAGCCACAGATTGTTGGAGATCCCTTCGAGATTGATGATGTAGAAGGATCTGTGTGCAATTATCCCATGGTTCTGGTTCAAATTCCAATGTGTAATGAGAGGGAGGTATACGACCAGTCTATTTCTGCAGTGTGCCAACTTGATTGGCCAAGGGATCGTTTACTGATTCAAGTACTTGATGATTCTGATGATGAGGACATCCAGTGGTTAATTAAAGCAGAGGTCACTAAGTGGAACCAAAAGGGAATTAACATAATCTATCGGCATCGCTTAATCAGGACTGGATATAAAGCTGGAAATCTTCAATCTGCAATGGGCTGTGACTATGTGAAAGACTATGAGTTTGTTGCAATTTTTGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAGCAAACTGTGCCACATTTCAAGGACAACCCTGAACTAGGTTTGGTGCAAGCTAGATGGTCTTTTGTGAACAAGGATGAAAATTTGTTGACTCGTCTCCAAAACATTAATTTATGCTTCCATTTTGAAGTAGAACAACAGGTCAATGGGGTATTCCTCAATTTTTTCGGTTTCAATGGAACTGCTGGTGTTTGGAGAATTCAAGCCCTAGAAGAGTCCGGGGGCTGGCTGGAGCGGACAACCGTAGAAGATATGGACATTGCTGTCCGAGCTCATCTTCATGGTTGGAAGTTTATCTTCCTAAATGATGTGAAGGTACTTTGTGAAGTTCCTGAGTCATATGAAGCTTATAGGAAGCAGCAACACCGCTGGCATTCAGGTCCTATGCAACTTTTTAGGTTGTGCCTTCCCGCAATTTTGAAATCTAAGGTCTCAGCATGGAAGAAAGCAAACCTAATACTGCTATTTTTTCTGTTAAGGAAACTAATCCTTCCCTTTTACTCCTTTACCTTATTTTGCATAATTCTTCCTTTAACCATGTTTGTCCCAGAGGCAGAACTTCCTCTATGGGTGATCTGCTATGTGCCTGTGTTCATGTCATTCCTTAACATTCTTCCTGCCCCGAAATCTTTTCCTTTCATCGTTCCCTACCTCCTCTTTGAAAACACCATGTCTGTCACCAAATTCAATGCAATGGTATCTGGACTCTTCCAATTGGGAAGCTCTTATGAATGGGTTGTCACGAAGAAGGCTGGAAGGTCGTCGGAGTCCGATTTACTCGCCGCTGCGGAAAGGGAAGCCAAATCAATAGATCAACCAAAGATACATAGAGGAGCTTCTGATAGTGAACTTGTTGAGTCACGCCATTTCAAGGAACTCAAAGAAGCAGCTCCAACACCTGTTAAGAAAACTAATAAGATATATAAGAAAGAGCTCACTTTGGCATTCCTTCTTCTCACAGCTTCTGTGAGGAGTTTGTTATCTGCACAAGGAGTTCACTTCTACTTTCTGCTTTTCCAAGGTATTACCTTCCTTCTTGTTGGTCTTGATTTGATTGGAGAGCAGATGAGCTAG 2067 0.433 MAPRLDFSNWGFKDSERGTPVVVKMENPTFSVVEINGADAAFRPVEKNRGKNAKQVTWVLLLKAHRAVGCVSWLATVLWALLGAIKKRLIHRESENLDKGRLLFRVIRMFLVTSMVVLGFEVVAYLQGWHFGNPRLLHIPRTSDLQGLFHMVYVAWVTFRAEYIAPPIQALTMFCVVMFLIQSVDRLLLCLGCFWMKFKKVKPQIVGDPFEIDDVEGSVCNYPMVLVQIPMCNEREVYDQSISAVCQLDWPRDRLLIQVLDDSDDEDIQWLIKAEVTKWNQKGINIIYRHRLIRTGYKAGNLQSAMGCDYVKDYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIQALEESGGWLERTTVEDMDIAVRAHLHGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAILKSKVSAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLAAAEREAKSIDQPKIHRGASDSELVESRHFKELKEAAPTPVKKTNKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGITFLLVGLDLIGEQMS* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3777 688 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 217 442 IPR029044 -
Lja1g3777 688 PANTHER XYLOGLUCAN GLYCOSYLTRANSFERASE 5-RELATED 1 688 - -
Lja1g3777 688 SUPERFAMILY Nucleotide-diphospho-sugar transferases 222 503 IPR029044 -
Lja1g3777 688 Pfam Glycosyl transferase family group 2 317 523 IPR001173 -
Lja1g3777 688 PANTHER - 1 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3777 Lja-Chr1 47412963 47416911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3777 1 688 Miscellaneous Gene Families AT4G31590 79.365 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3777 - - gmx:100790397 1241.1