Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3776 ATGGAGATCCGTGCCGACGCTGAAACCGGTCCCTATTCAAGTTTGGTCGCGGCAGTGTCGTATGGAATCGCTTCAATGGCCATGGTTTTTATCAACAAGGCTGTTCTTATGCAATATGCACACTCAATGACTCTCCTCACTTTGCAGCAATTGGCGACCGCATTGCTTATACATTTTGGCCGGAGAATGGGATACACAAGAGCTAAAGGAGTGGATATTGCAACAGCTAAGCAGCTGCTTCCGGTTTCGATTTTCTATAACGCTAACGTTGCTTTTGCTTTGGCGAGTTTGAAAGGAGTTAATATCCCAATGTATATTGCTATAAAGAGGCTTACACCGCTTGCTGTGCTTGTTGCTTGGTGTTTCTTAGGAAAGGGGAGGCCTACAACTCAGGTGACTCTTTCAGTGATACTGATTGCTGCTGGAGTTCTCATAGCAGCCCTTGGAGATTTTTCCTTTGACCTTCTTGGGTATAGCATGGCCTTCATTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTAGTGGAAAAATCTGGTGCTGAGAATGGTCTTTCATCAGTGGAAATCATGTTTTACAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTTATCATAGCAACCGGGGAATTCCCAAATTCTTTATCCATATTATTTGCAAAGAGTTATTCAGTTTCATTTTTGGCGATCCTTATTCTTTCATTGGTTATGGGCATCGTTCTCAACTACACCATGTTCTTGTGCACTGTTGTTAATTCTGCTCTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTTGGTTCCACGACTCTTGGTTTTGTCTTACTGGATGGTGTTCAAGTCCATGCTCTGAATGTGTCTGGATTGGTTATCAATACTGCTGGTGGTGTTTGGTATTCATATGCTAAATATCAGCAGAAAATGAGTAAGACAGTGAAGCTAGTTACAGACGTGGAGGCTCATCGCACATAG 972 0.4239 MEIRADAETGPYSSLVAAVSYGIASMAMVFINKAVLMQYAHSMTLLTLQQLATALLIHFGRRMGYTRAKGVDIATAKQLLPVSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAWCFLGKGRPTTQVTLSVILIAAGVLIAALGDFSFDLLGYSMAFISVFFQTMYLVLVEKSGAENGLSSVEIMFYNSFLSLPFLMFLIIATGEFPNSLSILFAKSYSVSFLAILILSLVMGIVLNYTMFLCTVVNSALTTTIVGVLKGVGSTTLGFVLLDGVQVHALNVSGLVINTAGGVWYSYAKYQQKMSKTVKLVTDVEAHRT* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3776 323 PANTHER SOLUTE CARRIER FAMILY 35 13 305 - -
Lja1g3776 323 PANTHER JC8.12-LIKE PROTEIN 13 305 - -
Lja1g3776 323 Pfam Triose-phosphate Transporter family 24 300 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3776 Lja-Chr1 47401038 47404763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3776 13 322 Lipid Metabolism Gene Families AT5G19980 26.970 2.31e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3776 K15281 - gmx:100777622 520.005