Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3772 ATGGCAGGGATAAACTTTGAAGCCAAACATATTGACAGCCATGATGTTCTGAAAATACTTGCAGCTGAAGGTGCTGAGTACCTTTTATCTTGTGAAGGGAAGGTACCCTTGTCAGAATGCGATGGGAAAGTCATCTGCCTATTTTTCTCTGCCAACTGGTGCAGGCCTTGCAGAGCTTTCGTTCCCCGTCTGGTTGAACTTTATGAAACACTGAGAAAGAGGGGAATAAATCTAGAGATCATCTTCGTCTCCTTTGACCGCGAGGAAGATGGATTCAATGAACACCTCAAGAGTATGCCATGGTTAGCTGTTCCATTTGATGTAAATTTGCATAGAAGACTGATTGACAGATACCAAGTTGATCAAATCCCATCATTCATTCCACTATATTCAGAGGACTTAATTGTTGAAAAAAACTTGATTGAGTGCATTGAGGATTATGGTGCTGATGCATTTCCTTTCACAAGGAAGAGGCATGAGGAATTGAAAGCCATAGATAAAAGGAAGCGCGAAGAAGCAAATTTGGAAGAGCTATTGGCACACGAGGGACGGGACTTTCTGATCTCCGGAGATGATAGAAAGGTACCTGTATCTGAGCTAGCTGGTAAAACCATAGGTCTATATTTCTGTGCCTACTGGTCTCCTCCAAGCCGTGCCTTTACCGCGCAACTTACAGATGTATACAACAATCTCAAGGCTACAAAAGGCAATTGCTTTGAGATTGTTCTAATCTCAACAGATAGGGACCATAAGGAATTCAATGTCAACAGAAGTAGTACGCCATGGCTTGCTATCCCATATGAGGACAGAACAAGGCATGACCTTTGTAGAATCTATGATATAAAGGGAATTCCAGCTTTGGTTCTTATTGGACCTGATGGCAAAGTCATTAGTTTAAATGGGAAGTTTATGGTAACCTCATATGGTGCAGATGCTTTCCCATTTACTGAATCGCGGATAAGAGACCTAGAAGCAGCTTTAAGAAAGGAAGGAGAGGCTTTGCCTCAACAGGTTGAGGATGTCAAGCATGAACATGTTCTGAAATTGGATATGGCCAAAGCATATGTGTGTGATTCCTGTAAAGAACAAGGGAAGTTCTGGGCATTCTCGTGTGATGTCTGTGATTATGATCTTCATCCAAGTTGTCTCGAAAAGGTCAACAAAGACCAAGATTGGTAG 1179 0.4207 MAGINFEAKHIDSHDVLKILAAEGAEYLLSCEGKVPLSECDGKVICLFFSANWCRPCRAFVPRLVELYETLRKRGINLEIIFVSFDREEDGFNEHLKSMPWLAVPFDVNLHRRLIDRYQVDQIPSFIPLYSEDLIVEKNLIECIEDYGADAFPFTRKRHEELKAIDKRKREEANLEELLAHEGRDFLISGDDRKVPVSELAGKTIGLYFCAYWSPPSRAFTAQLTDVYNNLKATKGNCFEIVLISTDRDHKEFNVNRSSTPWLAIPYEDRTRHDLCRIYDIKGIPALVLIGPDGKVISLNGKFMVTSYGADAFPFTESRIRDLEAALRKEGEALPQQVEDVKHEHVLKLDMAKAYVCDSCKEQGKFWAFSCDVCDYDLHPSCLEKVNKDQDW* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3772 392 SUPERFAMILY Cysteine-rich domain 334 384 IPR046349 -
Lja1g3772 392 PANTHER NUCLEOREDOXIN 3-RELATED 1 385 - -
Lja1g3772 392 PANTHER THIOREDOXIN 1 385 - -
Lja1g3772 392 SUPERFAMILY Thioredoxin-like 189 297 IPR036249 -
Lja1g3772 392 ProSiteProfiles Thioredoxin domain profile. 17 170 IPR013766 -
Lja1g3772 392 ProSiteProfiles Thioredoxin domain profile. 177 325 IPR013766 -
Lja1g3772 392 Gene3D Glutaredoxin 178 317 - -
Lja1g3772 392 Pfam Thioredoxin-like 202 296 IPR012336 -
Lja1g3772 392 Pfam Thioredoxin-like 42 127 IPR012336 -
Lja1g3772 392 CDD TryX_like_TryX_NRX 185 315 IPR045870 GO:0004791
Lja1g3772 392 Gene3D Glutaredoxin 22 158 - -
Lja1g3772 392 SUPERFAMILY Thioredoxin-like 35 133 IPR036249 -
Lja1g3772 392 Pfam C1 domain 342 382 IPR004146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3772 Lja-Chr1 47369418 47372895 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3772 K17609 - gmx:100778160 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3772 1 47369418 47372895 Lja1g3772 1 47369418 47372895 ECH