Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3771 ATGGAATATCCCATTCTCTCCAGAAACGCTGTCTGTGCGCGCGCGCGCCACATTTCATCGATTTCCAATTCAAGGTCACTGTCGTCACTCTTCACCTTTACCCTAAACAAACGCAAATGCCCTAACTTCACCATTCGAGTTCCTCGATCGTTACAGTTACAGAAGAAAGAGCGAGTGGCAGTGGTAGCTAGGGTTTCTATGAGCTGGTCTAATGGCATTCAGGAACCTAGGGTTCTAGTTGCACCTGATCCTGGTATAGATGGAAATTGTTCGGGACATATGATATTGCTCCGTCATCCCAAAACTGGGAATGGAACACAGTATCTCTTTGTAAATGGGGCACTTCAAGAGCTTCAATGGTTTAAGAACTTATATGGATCTTGGTTTTTGGGAGATTATACATGTGAAGATGGTCGGATGTATTTATCCACACCAGTTGATCCTGTTTTCATCATGCTACCCATATTTGAGGAGGCTAGAATGAAGAAAAGGGATGGTGATCTTGGGAATTTCAGGCAATTGGATGAAATCTTGTATATTGATGGGTATCCTGGATATCATCAGTTAATGTCCACCGTGGAGAACTGTATGCAAGTAGTTTGTGAAGTCAAAGAAGTTGGATCCTTAAAATTCTTCAGGCTTGATGACTCAAAGGTTCTACGTTGGTTGTGCTACAAGGCTTGCCAGCTAAAACAGACACTACCCAAATTGGACAAAAACTATGCTGTTCAATCAGAGAAAGACACATTGGTTGATGCAGTCTCTATATTAGGAGAATATTTGAAGGAAGAACCTTGGTTGCAGCTTTTGTGCAACCACCTTAAGTTAAATTTGCTTGAGGTAACTGGAAGAACACAAGTAAACACAGAAGAAAGTAGCGCAGGTTTATATAATGAATCACAGGAACCGAATGATGAAAAGAAGGCCCCAATTGCCAAGAAAGGTAGGCAAGCAAAGAAGACAAAACTAGAGACAGAATCGCATAACATTAAAGACATGTTTTCAAGAGCCTCAAGAAAGAAAAGCTAA 1029 0.413 MEYPILSRNAVCARARHISSISNSRSLSSLFTFTLNKRKCPNFTIRVPRSLQLQKKERVAVVARVSMSWSNGIQEPRVLVAPDPGIDGNCSGHMILLRHPKTGNGTQYLFVNGALQELQWFKNLYGSWFLGDYTCEDGRMYLSTPVDPVFIMLPIFEEARMKKRDGDLGNFRQLDEILYIDGYPGYHQLMSTVENCMQVVCEVKEVGSLKFFRLDDSKVLRWLCYKACQLKQTLPKLDKNYAVQSEKDTLVDAVSILGEYLKEEPWLQLLCNHLKLNLLEVTGRTQVNTEESSAGLYNESQEPNDEKKAPIAKKGRQAKKTKLETESHNIKDMFSRASRKKS* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3771 342 PANTHER RIBONUCLEASE H2 SUBUNIT B 66 341 IPR040456 GO:0032299
Lja1g3771 342 MobiDBLite consensus disorder prediction 290 342 - -
Lja1g3771 342 MobiDBLite consensus disorder prediction 301 336 - -
Lja1g3771 342 Pfam Ydr279p protein family (RNase H2 complex component) wHTH domain 150 240 IPR019024 -
Lja1g3771 342 CDD RNase_H2-B 78 232 IPR040456 GO:0032299
Lja1g3771 342 Pfam Ydr279p protein triple barrel domain 94 147 IPR041195 -
Lja1g3771 342 Gene3D - 75 145 - -
Lja1g3771 342 Gene3D - 146 275 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3771 K10744 - gmx:100305835 464.536