Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3769 ATGGTTTTCTGGGTTTTTGGATATGGTTCACTGGTGTGGAACCCAGGATTTGAGTATGATGAGAAGGTTATTGGTTACATAAAGGATTACAGACGTGTGTTTGATTTAGCGTGCATTGATCACAGAGGTACACCTGAACACCCTGCTAGAACTTGCACATTGGAGGAGAAAGAAGGAGAAATTTGCTGGGGAGCAGTTTATTGTGTTCGAGGAGGCCCTGAGAAGGAAAAATTGGTTATGCAGTATTTGGAGCGACGAGAATGTGAGTATGATCATAAGACTCTGGTAGACTTCTACAAGGAAGGAGATTCATCACACCCTGCTCTTACTGGAGTCATAGTATTCACATCTACTCCAGACAAAGTTAACAACAAATACTACCTGGGACCTGCTCCACTGGATGTCATGGCTAGGCAAATAGCAACTGCTCATGGCCCTTGTGGAAACAACAGGGACTACCTTTTCCTTCTTGAAAAGGCCATGCATAATATTGGCCATGAGGACGATATGGTGATAGAACTTGCCCATGAAGTGAGGAAAGTACTTGGAGTGGGGAATGTACTTCCAAACGACAAAAAATTGTCCGGACCAGTGCAAATTCAACACTCTCCTCATGCACCCATCCCAGCCCTTCAATTGCTCCCAATGCCGGAACCTATTGCTTTGGATAGTTGA 675 0.4444 MVFWVFGYGSLVWNPGFEYDEKVIGYIKDYRRVFDLACIDHRGTPEHPARTCTLEEKEGEICWGAVYCVRGGPEKEKLVMQYLERRECEYDHKTLVDFYKEGDSSHPALTGVIVFTSTPDKVNNKYYLGPAPLDVMARQIATAHGPCGNNRDYLFLLEKAMHNIGHEDDMVIELAHEVRKVLGVGNVLPNDKKLSGPVQIQHSPHAPIPALQLLPMPEPIALDS* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3769 224 CDD GGCT_like 5 110 IPR013024 -
Lja1g3769 224 PANTHER CATION TRANSPORT PROTEIN CHAC-RELATED 1 224 IPR006840 GO:0003839|GO:0006751
Lja1g3769 224 Gene3D - 2 177 - -
Lja1g3769 224 PANTHER GAMMA-GLUTAMYLCYCLOTRANSFERASE 2-2 1 224 - -
Lja1g3769 224 Pfam ChaC-like protein 4 180 IPR006840 GO:0003839|GO:0006751
Lja1g3769 224 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 2 99 IPR036568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3769 Lja-Chr1 47308523 47311154 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3769 K22596 - gmx:100793027 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3769 1 47308523 47311154 Lja1g3769 1 47308523 47311154 ECH