Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3766 ATGACGAGCGTGAAGATGAGTAGTGGAAATCCAGTGAGAATGGGTGGCGATAATCACAACGTCTTCGTCTATGGAAGCCTCTTAGCCGATGAGGTTGTTCGCATTCTCCTGAAGCGTGTTCCTCCATCCACACCCGCAACTCTCCCCGACTATCACAGGTTCAAGATCAAAGGTCGCGTTTATCCCGCTATTCTACCAGTCCAGAATAACAACAAAGTTACTGGCAGGGTCCTTCTTGGTATCTCAGGATTGGAATTAGATATATTAGATGAGTTTGAGGATGTTGAATACACTAGAAGTGATGTGGAGGTTTTCTTGATGGATAATTCTGAAAAGATGCAAGTCTACGCCTATGTCTGGAGCAACAAAGATGATCCTGACTTATATGGAGAGTGGGAATTTGAGGAATGGAAACAAGTTCACATGAAAGATTTTGTCAAGATGACCGATGAATTTAAGGAACAGTTGGAATTGCCCGAATCAAAGCCAAGAGTTCAGACGTATGAAACCTTCTACAAGCAGGAAAACGATAAGCCACATGAACCTTGA 549 0.4317 MTSVKMSSGNPVRMGGDNHNVFVYGSLLADEVVRILLKRVPPSTPATLPDYHRFKIKGRVYPAILPVQNNNKVTGRVLLGISGLELDILDEFEDVEYTRSDVEVFLMDNSEKMQVYAYVWSNKDDPDLYGEWEFEEWKQVHMKDFVKMTDEFKEQLELPESKPRVQTYETFYKQENDKPHEP* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3766 182 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 21 133 IPR009288 -
Lja1g3766 182 PANTHER AIG2-LIKE PROTEIN D 10 163 IPR045038 -
Lja1g3766 182 CDD GGCT_like 21 120 IPR013024 -
Lja1g3766 182 PANTHER AVRRPT2-INDUCED PROTEIN 2-LIKE 10 163 - -
Lja1g3766 182 MobiDBLite consensus disorder prediction 159 182 - -
Lja1g3766 182 Gene3D - 11 126 - -
Lja1g3766 182 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 19 138 IPR036568 -
Lja1g3766 182 Gene3D - 127 176 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3766 - - gmx:100527521 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3766 1 47268091 47270394 Lja1g3766 1 47268091 47270394 ECH