Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3765 ATGACTGATCAGGCAAGAACAGGTTCCTACGGTTCTTCCTATGGTTCCTCCTATGACACCAACATGAACATGAACATGAACAACAACCCTGCACCCTCACGCCAAACCATCAAGTTCTTGACTGCTGCAACCATTGGTATCACACTGTTGCTCTTGTCTGGTTTGATTCTCACTGGGACTGTCATAGGGTTGATCATTGCAACCCCACTTCTTGTTCTGTTCAGCCCCATTTTAGTCCCTGCTGCCATAATCCTGTCTCTTGCTGCTGGTGGTTTCATGTTCTCTGGTGGATGTGGTGTGGCTGCAGTTGCTGCATTGTCATGGATTTACAACTATGTCTCTGGGAAGTACCCTGCAGGTTATGACACTCTTGACTATGCTAGAGGGATGATTGCTGATAAAGCTAGGGATGTCAAGGAAAGGGCTAAGGATTATGGGAACTATGCTCAGGGTAGAGCACAAGAGGCCACACATGGAAATCAGATAACATGCAAAATTAGAAGTTACAAATAA 513 0.4561 MTDQARTGSYGSSYGSSYDTNMNMNMNNNPAPSRQTIKFLTAATIGITLLLLSGLILTGTVIGLIIATPLLVLFSPILVPAAIILSLAAGGFMFSGGCGVAAVAALSWIYNYVSGKYPAGYDTLDYARGMIADKARDVKERAKDYGNYAQGRAQEATHGNQITCKIRSYK* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3765 170 ProSitePatterns Oleosins signature. 59 81 IPR000136 GO:0012511|GO:0016021
Lja1g3765 170 PANTHER OLEOSIN 23 158 IPR000136 GO:0012511|GO:0016021
Lja1g3765 170 Pfam Oleosin 35 146 IPR000136 GO:0012511|GO:0016021
Lja1g3765 170 PANTHER OLEOSIN 23 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3765 Lja-Chr1 47266096 47267351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3765 25 138 Lipid Metabolism Gene Families AT2G25890 61.404 2.53e-40 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3765 - - gmx:100301903 202.216