Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3758 ATGGCGCCTCCGAAGCTCTTCCTATTCACGCTTTCCCTAGCCCTAATTTTCTCCATCTCCGCCGCCGACGCCGGTGTTTCCCACGACGATTCCGTCAAGATCCAATTAGATCAACTCAATTCCAGGATCCTAACTCTCGAATCTCAAATCAAGGACAAGTCTCAAGAGCTGAAGAAGAAGGATGAAGTAATAGCAGAAAAAGAGAAATTCATTCAAGATAAATCGAGTACCGTTGAATCCTTGCAGAATGAGGTTGCTTCTCTACAGAAAAAAGGGTCATTGGATGCTCAGGAGGAGGTGGGAAAGGCTCATGCACGTGCTGGTGAACTTCAGAAGCAGGTGGAGAATCTTAAAAGGGAACTTGAAAAACAAAACAAAGAGAAAGTAAACTGGGAAACTCGGGTAGCTGAGTTGGAGAAGAAGATTCATGATTTGAACTCAAAACTAGAGGATATTCAAAAGGTAAATGAGGAACAGAAGACAAAAATTCGTAAAACTGAGCGTGCTCTTAAAGTTGCTGAGGAAGAAATGGTGAAGGCAAAGCTAGAGGCAAATTCCAAAGCCAGGGAGCTGATAGAGGCTCATGGTAATTGGCTTCCTCCTTGGCTTGCTGTACACTATATTCGCAGTAAGTCCTTGGTTGAGGCTCATTGGAATAAACATGGGAAACCTGTGCTGGAAGTGGTTACTCAGAAGGCCCTGGAGAAAAAGGCACAAGCTGAAAAGTGGGCTGAACCTCATCTGGAAACAGTTAAAACTAAATGGATCCCAGCTGTAAAACAACAGTGGTCTGAGGTGAAAACACAAGCTGAACCTCGTGTGCAATTATTGAGAACTAAATCTTTTGAAGTTTATGAGACATCAAAGAAGGCAATTGATCCCCACTTTAGCAATGCAAAAGAGTTTGTAGATCCTTATTATCAGGAAGCAAGAAAGTTAAGCAAGCCATACATTGATCAGGTTGCTGTCGCAGCCAAACCTCATGTTGATAAAGCACAAGTGGTTCTAAAGCCCTACACAAAGAAAGTCGTTCATGCTTATAGAAATTTCTTACAATCGGCCACTACTTATCATCGCCAGGTCCAAGCTACTGTCCAGGAGACACTGAAAAAGCATGAGCTTACTAGACCTCTAGCTACTAAAGAGTTGGAATGGTTTGCGGCCTCTGCCCTTTTGGCCTTACCTATTATTTTACTGGCTAGAGCTTTTTCTGCTATTTTCTGCAGCAAAAAAGTGAATAAACCTGCTCGAAGTGGAAACACCCATCACGCTCGCCGTAAAGCTAAGCGAGTGCATCCAGACAAATAG 1308 0.432 MAPPKLFLFTLSLALIFSISAADAGVSHDDSVKIQLDQLNSRILTLESQIKDKSQELKKKDEVIAEKEKFIQDKSSTVESLQNEVASLQKKGSLDAQEEVGKAHARAGELQKQVENLKRELEKQNKEKVNWETRVAELEKKIHDLNSKLEDIQKVNEEQKTKIRKTERALKVAEEEMVKAKLEANSKARELIEAHGNWLPPWLAVHYIRSKSLVEAHWNKHGKPVLEVVTQKALEKKAQAEKWAEPHLETVKTKWIPAVKQQWSEVKTQAEPRVQLLRTKSFEVYETSKKAIDPHFSNAKEFVDPYYQEARKLSKPYIDQVAVAAKPHVDKAQVVLKPYTKKVVHAYRNFLQSATTYHRQVQATVQETLKKHELTRPLATKELEWFAASALLALPIILLARAFSAIFCSKKVNKPARSGNTHHARRKAKRVHPDK* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3758 435 Coils Coil 71 91 - -
Lja1g3758 435 MobiDBLite consensus disorder prediction 414 435 - -
Lja1g3758 435 Gene3D Apolipoprotein 211 356 - -
Lja1g3758 435 SUPERFAMILY Apolipoprotein A-I 226 368 - -
Lja1g3758 435 PANTHER OS08G0519400 PROTEIN 1 435 - -
Lja1g3758 435 SUPERFAMILY Tropomyosin 31 189 - -
Lja1g3758 435 Coils Coil 100 190 - -
Lja1g3758 435 Gene3D - 30 210 - -
Lja1g3758 435 Coils Coil 36 56 - -
Lja1g3758 435 PANTHER OS08G0519400 PROTEIN 1 435 - -
Lja1g3758 435 MobiDBLite consensus disorder prediction 416 435 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3758 - - lja:Lj1g3v2035120.2 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3758 1 47174997 47181298 Lja1g3758 1 47174997 47181298 ECH