Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3749 ATGGGTTGCGCTCAGTCAAGGATAGACAACGAGGAATCAGTAGCTCGCTGCAAGGAGCGCAAGAATCTCATGAAAGACGCCGTCGTTGCTCGTAACGCCTTCGCATCCGGCCACTCCGGCTACGCCATCTCTCTTAAAAACACCGGCGCCGCCCTCAACGACTACGCCCACGGCGAGTCCCACATCGACCTCGAAATCCACCCGCCTCCACCTCTCGACAACGGTTCTAGCCCTCCGCCTCCTCCTCCTATGGATGATAATCTCCCTCCGCCGCCTCCGCCGCTTCCTAACTTCTCCCCGGCATCGCTGAAACGCGCCGCCTCCATGCCTGCTGTGGCTCTGCAGCTCCACCGCCAGCTCTCCCCCATCGCCATTGCTGAAGAGGGGGAGGAGGAGGAGGAAGAGGAAGATGGGGCGAATGTGGACAAGCTGGTGAAGAAGAAGGGCGCTGCCGCCGACACGACGCCGGAGAAGATGCCGGATTCGAAGAACAACTTGGCTTGGGACTATTTCTTCATGGTGGATAACATGCCAGGACCTTCTTTGGATGGGGAAGATGAGAACGAAGGTGAGAATGGACACTTGCAGGAGGAGGAAGAGGAAGAGGAGGAGGTTGAGCCTAAGACACCGGAAATGGTGAAGGTGCGCCACCATGAAGATGAAGATGAACATGAAGGGGAGATAACAGAGACGGCACACATTGAGCATTCCAAAACAGCACCAGCTGATTTTAGGAGAGCAATTAAGGTGGCTCCTTCTGTTACTCTTTTGCAGATTCTCAATTCCCTTGATGATCATTTCTTAAGAGCTTCTGAAAGTGCTCAAGAAGTTACCAAGATGCTTGAGGCTACTAGATTGCATTATCATTCCAATTTTGCTGATAATAGGGGTCACATTGATCATTCTGCTAGGGTTATGCGCGTGATAACTTGGAATAGGTCATTCAGGGGTGTGTCCAATGGTGATGGTGCAAAAGATGATGTTGATTCAGAAGAATTTGAAACTCATGCTACTGTTTTGGACAAGTTGTTAGCCTGGGAAAAGAAACTTTATGAAGAAGTGAAGCAAGGTGAGCTTATGAAATTCGAATATCAGAGAAAAGTTGCAATTCTGAACAAGCAGAAGAAGCGTGGCGCCAGTGTCGAATCATTAGAAAAAACTAAAGCAGCTGTTAGTCATTTACACACAAGATATATTGTTGATATGCAGTCTATGGATTCAACAGTTTCAGAAGTCAATCACATCCGTGATGCTCAGTTGTATCCCAAACTTGTTGCTCTTGTTACTGAGATGGCCAACATGTGGGAAAATATGTGCATACATCATAACAGCCAGCTGAAAATAGTTACAGACCTCAAATCTCTTGATATTTCTCAAGCTCCTAAGGAAACAACTAAGCATCATTATGAGCGTACGGTGCAACTTTGGAATGTCATCCAAGAATGGCATTTACAATTTGAGAAACTCGTGACTCAACAGAAACACTACGTCCAAGCCCTTAATAGCTGGCTAAAGTTAAATCTCATTCCGATTGAAAGCAACCTAAAAGAGAAAATCTCATCCCCACCAAAAGCCCAGAATCCACCCATCCAAGCCCTTCTTCATGGGTGGCATGATTATCTTGACAAGCTTCCGGATGAGCTTGCAAAATCTGCTATATCCTCCTTCGCTGCTGTGATAAAGACGATCATAATTCAGCAGGAGGAAGAGATGAAGTTAAAAGAGAGATGTGAGGAAACCAGAAAAGAATACTTGAAGAAAAAACAGTCCTTTGAGGAATGGTACCAGAAGCATTTAATGAGGAGGGGACCTGATGAAGCAGATCATGAAAGAGGAGAGGAAGTGAATACAAACAATCCGGTCTCGGAGAAACGGTTTGTTGTTGAGAGCTTGCAGAAAAGATTAGAAGAGGAAGTTGAATCTCACCAAAAACTTTGTATTCAGGTGCGAGAGAAATCACTCCAGAGTCTCAAAACTCGGTTGCCTGAGCTCTTTAGAGCATTGTCAGATTACACCCATGCTTGTGCTGATGGTTATGAGAAACTAAAGTCAATCACACAGCCCCGAGTTGCTGTGGCGTGA 2082 0.4654 MGCAQSRIDNEESVARCKERKNLMKDAVVARNAFASGHSGYAISLKNTGAALNDYAHGESHIDLEIHPPPPLDNGSSPPPPPPMDDNLPPPPPPLPNFSPASLKRAASMPAVALQLHRQLSPIAIAEEGEEEEEEEDGANVDKLVKKKGAAADTTPEKMPDSKNNLAWDYFFMVDNMPGPSLDGEDENEGENGHLQEEEEEEEEVEPKTPEMVKVRHHEDEDEHEGEITETAHIEHSKTAPADFRRAIKVAPSVTLLQILNSLDDHFLRASESAQEVTKMLEATRLHYHSNFADNRGHIDHSARVMRVITWNRSFRGVSNGDGAKDDVDSEEFETHATVLDKLLAWEKKLYEEVKQGELMKFEYQRKVAILNKQKKRGASVESLEKTKAAVSHLHTRYIVDMQSMDSTVSEVNHIRDAQLYPKLVALVTEMANMWENMCIHHNSQLKIVTDLKSLDISQAPKETTKHHYERTVQLWNVIQEWHLQFEKLVTQQKHYVQALNSWLKLNLIPIESNLKEKISSPPKAQNPPIQALLHGWHDYLDKLPDELAKSAISSFAAVIKTIIIQQEEEMKLKERCEETRKEYLKKKQSFEEWYQKHLMRRGPDEADHERGEEVNTNNPVSEKRFVVESLQKRLEEEVESHQKLCIQVREKSLQSLKTRLPELFRALSDYTHACADGYEKLKSITQPRVAVA* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3749 693 Coils Coil 632 652 - -
Lja1g3749 693 MobiDBLite consensus disorder prediction 207 238 - -
Lja1g3749 693 PANTHER DNA LIGASE (DUF630 AND DUF632) 1 689 - -
Lja1g3749 693 MobiDBLite consensus disorder prediction 182 206 - -
Lja1g3749 693 PANTHER UNCHARACTERIZED 1 689 - -
Lja1g3749 693 MobiDBLite consensus disorder prediction 177 238 - -
Lja1g3749 693 Coils Coil 563 583 - -
Lja1g3749 693 MobiDBLite consensus disorder prediction 62 103 - -
Lja1g3749 693 MobiDBLite consensus disorder prediction 71 99 - -
Lja1g3749 693 Pfam Protein of unknown function (DUF632) 256 561 IPR006867 -
Lja1g3749 693 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3749 Lja-Chr1 47094053 47097570 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3749 1 583 Acyl Lipid Metabolism Gene Families AT2G27090 24.457 2.81e-45 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3749 - - gmx:100807189 1015.37