Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3747 ATGGAGTATCCTCTTCTATCCGTTTGTGCTTTACTCAGTGTTTTGTTGGTGGCTACCAGTCATGCTGCCTTACCTCCTGAACTATACTGGAAGTCTGTCCTTCCTACTACACCAATGCCAAAAGCTATCACTGATATCCTTTACCCAGATTGGGTGGAAGAGAAAAGCACCAACGTGGGTGTAGGAAAGGGTGGTGTAAATGTTGATGCAGGGAAAGGAAAGCCCGGACACACCAAAGTGGATGTTGGAAAAGGAGGTGTAAATGTTAATGCAGGAAAAGGAAGTGGCGGTGGCCACGGCGGTACCAATGTCAACGTTGGCGGTGGAAAAGGTGGAGGAGTTTCAGTCCACACAGGCCACAAGGGAAAGCCTGTGTTTGTTAACGTTGGCTCAAAATCCCCATTTGATTACGTTTATGCTGCAACTGAGACCCAATTACACAGTGATCCCAATGTAGCACTCTTCTTCTTGGAGAAAAACTTGCACCCTGGAACAAAAATGAACTTGCACTTCACCAAAACCTCAAACAAAGCCACTTTCTTGCCTCGTATAGTTGCAGATTCAATACCCTTTTCATCTGAAAAGGTGGAACTTGCATTGAACAAATACTCAGTGAAAGCCGGGTCAGAGGAGGCTCAAGTCATGAAGAACACAATTGATGAGTGTGAACAAAAGGGGATTCAAGGTGAGGAAAAGTACTGTGCAACTTCACTTGAATCCATGGTTGATTTCACCACTTCCAAGCTTGGGGAAAATGTTAATGCTGTGTCCACTGTGGTGGACAAAGAAACAGAAAAACAAAGATACACGATTGCAACAGGGGTGAAGAAATTAGAAGCAGGGGACAAAGCTGTTGTGTGCCACAAGCAGAATTATCCATATGCTGTGTTTTACTGTCATAAGAGTGATAGTACAAGGGCTTACTCTGTGCCTTTGGAGGGTGATAATGGGGTTAGAGTTAAAGCTGTTGCTGTGTGCCACACAGACACATCACAATGGAACCCAAAGCACTTGGCTTTTCAAGTGCTCAAGGTTAAGCCAGGGACCGTTCCAGTTTGCCATTTTCTTCCTGAGGATCATGTTGTTTGGGTTTCCAAGTAG 1101 0.4487 MEYPLLSVCALLSVLLVATSHAALPPELYWKSVLPTTPMPKAITDILYPDWVEEKSTNVGVGKGGVNVDAGKGKPGHTKVDVGKGGVNVNAGKGSGGGHGGTNVNVGGGKGGGVSVHTGHKGKPVFVNVGSKSPFDYVYAATETQLHSDPNVALFFLEKNLHPGTKMNLHFTKTSNKATFLPRIVADSIPFSSEKVELALNKYSVKAGSEEAQVMKNTIDECEQKGIQGEEKYCATSLESMVDFTTSKLGENVNAVSTVVDKETEKQRYTIATGVKKLEAGDKAVVCHKQNYPYAVFYCHKSDSTRAYSVPLEGDNGVRVKAVAVCHTDTSQWNPKHLAFQVLKVKPGTVPVCHFLPEDHVVWVSK* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3747 366 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 9 56 IPR044816 -
Lja1g3747 366 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 106 364 IPR044816 -
Lja1g3747 366 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 9 56 - -
Lja1g3747 366 PANTHER BURP DOMAIN-CONTAINING PROTEIN-RELATED 106 364 - -
Lja1g3747 366 SMART BURP_2 153 366 IPR004873 -
Lja1g3747 366 Pfam BURP domain 154 364 IPR004873 -
Lja1g3747 366 ProSiteProfiles BURP domain profile. 155 366 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3747 Lja-Chr1 47053163 47056031 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3747 - - lja:Lj1g3v2036410.1 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3747 1 47053163 47056031 Lja1g3747 1 47053163 47056031 ECH