Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3746 ATGGACTATTACCTGAGAGAAATTGAAGGGAAGCAAGCTCATGACCCTTTATTCATGAAGAACAAATCACCATCATCAACTGAGAGATGTGTCTGGGTTCCAGGGCCAGTGATTGTAGGAGCAGGACCTTCAGGGCTAGCAGCAGCAGCATGTCTCAAAGAGAAAAACATTCCAAGTGTAATCCTTGAAAGATCCAATTGCATAGCTTCTTTATGGCAACTCAAAACCTATGATCGTCTTCGTCTTCATTTGCCAAAGCAATTCTGTGAACTACCCTTCATGGAGTTCCCTGAAGATTTCCCAACATACCCTTCAAAGCAGCAATTCATCCAATACTTGGAGTGCTATGCAGCGAGGTATGGGATTAGGCCAAGGTTCAATGAGACAGTGAAGCATGCTGAATTTGACACCACGCTAGGGTGTTGGAGATTGAAGAGTTTTGACCACAAGGCGGAGATCACCACGGAGTATATCTGCCGGTGGCTGATAGTGGCCACCGGAGAGAATGCGGAGGCGGTGGTGCCGGAGATTGAAGGAACAGGGGAATTCGGAGGTTCCATAAAGCACACTAGTTTGTATAAGAGTGGTGAGGAATTTAGAGGGAAGAGGGTTTTGGTTGTGGGGTGTGGAAATTCTGGCATGGAAGTGTGTTTGGATCTTTGCAATCACAATGCTACTCCTTCTCTTGTTGCAAGAGACACGGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTCGGGTTGTCCATGTGGTTGCTCAAGTGGTTGCCCATAAGAATTGTCGACCGGTTCTTGCTGATAGTGTCATGGCTCATGCTTGGCGACACGGCCCGGCTCGGGTTGGACCGGCCTCAGTTGGGTCCTCTTGAGCTTAAAAACCGGTCTGGGAAGACCCCTGTACTAGACGTGGGTACCCTTGCCAAGATTAAAGGTGGAGCCATTAAGGTGCGTCCAGGTATAAAGCGGCTAAAACATCATGCAGTGGAATTCATAGATGGCAGGACAGAAAATTTTGATGCCATCATTTTAGCAACTGGTTACAAAAGCAATGTGCCCTATTGGCTTAAGGAAGAGAATATGTTCTCTAAGCAAGATGGATTCCCAAAGAGTCCATTCCCAAATGGGTGGAAAGGTGAAAATGGACTCTATGCAGTGGGTTTTACCAAAAAGGGACTACTAGGTGCATCCATGGACGCCAAGAAAATTGCTGATGATATTAAACGGTGTTGGGAAGGTGATGAGGCAAAGGAAATAGCTGTTTTTGCTCGATCAATTTTGCCACAATCAAATTCATGA 1302 0.4631 MDYYLREIEGKQAHDPLFMKNKSPSSTERCVWVPGPVIVGAGPSGLAAAACLKEKNIPSVILERSNCIASLWQLKTYDRLRLHLPKQFCELPFMEFPEDFPTYPSKQQFIQYLECYAARYGIRPRFNETVKHAEFDTTLGCWRLKSFDHKAEITTEYICRWLIVATGENAEAVVPEIEGTGEFGGSIKHTSLYKSGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVARDTVHVLPREMLGKSTFGLSMWLLKWLPIRIVDRFLLIVSWLMLGDTARLGLDRPQLGPLELKNRSGKTPVLDVGTLAKIKGGAIKVRPGIKRLKHHAVEFIDGRTENFDAIILATGYKSNVPYWLKEENMFSKQDGFPKSPFPNGWKGENGLYAVGFTKKGLLGASMDAKKIADDIKRCWEGDEAKEIAVFARSILPQSNS* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3746 433 Pfam Flavin-binding monooxygenase-like 38 356 IPR020946 GO:0004499|GO:0050660|GO:0050661
Lja1g3746 433 PRINTS Pyridine nucleotide disulphide reductase class-II signature 35 57 - -
Lja1g3746 433 PRINTS Pyridine nucleotide disulphide reductase class-II signature 199 223 - -
Lja1g3746 433 Gene3D - 35 414 IPR036188 -
Lja1g3746 433 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 24 417 - -
Lja1g3746 433 SUPERFAMILY FAD/NAD(P)-binding domain 37 240 IPR036188 -
Lja1g3746 433 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA6 24 417 - -
Lja1g3746 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 203 221 - -
Lja1g3746 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 36 55 - -
Lja1g3746 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Lja1g3746 433 SUPERFAMILY FAD/NAD(P)-binding domain 202 419 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3746 Lja-Chr1 47013495 47018339 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3746 K11816 - gmx:100799546 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3746 1 47013495 47018339 Lja1g3746 1 47013495 47018339 ECH