Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3745 ATGGTTCTTCTTCACCCCTCCAGATTCCCCTTCTCCTTATTAACCTTATCCCCATCACTCTCACTCCGACCCTATTCCAAAACCACCCTCTTATTCCAACCCAAATCCACCCTCACCACCACCCTAACCCCTTCTTCCCCACCACCCTTCCCCCTCGACAAACTCTTCATCCCGCCGGAGACAAAACTCCCTCTCGACGCCGCCGCCGCCAGAATTCTCAACGGCTCCAACATCCTCCTCAGCGACTACGCCTCCGACGCTCAGGTCCTGCAAGCCGACTTCGTCAAAAGCAGCGTCGAAACCGACGCTTGCCCCTCCGATGGCCTCCCTGAGTTCGCCCTCGTTGGTCGCTCCAATGTCGGCAAATCCTCGCTCCTCAACTCTCTTGTTCGCCGCAAGAAACTCGCCTTGACTTCGAAGAAACCTGGGAAGACTCAATGCATTAACCATTTTCGGATTAATAATAGCTGGTACCTGGTTGATTTGCCTGGATATGGGTACGCATCTGCACCAAAGGAACTTAGAATGGATTGGGAGAAATTTTCCAAAGACTATTTCCTTAACCGGTCAACCTTAGTTTCTGTTTTCCTTCTAATAGATGCTAGCATTCCCGCTAAAAAAATTGATCTCGATTATGCCAGTTGGTTGGGTCAGAATCAGATCCCGATGACATTAATCTTCACCAAATGTGATAAACGGAAGAAGGTAAAGAACGGAGGCAAAAGACCAGAAGAAAATGTCAATGATTTTCAGGACTTGATACGTGGCTTCTTTCAAACAGTGCCTCCATGGATCATGACCAGTAGTGTCACCCATCAGGGTCGTGATGAGATACTCCTCCATATGGCCCAGCTACGGAATTACTGGCTGAAGCACTAG 879 0.4926 MVLLHPSRFPFSLLTLSPSLSLRPYSKTTLLFQPKSTLTTTLTPSSPPPFPLDKLFIPPETKLPLDAAAARILNGSNILLSDYASDAQVLQADFVKSSVETDACPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINNSWYLVDLPGYGYASAPKELRMDWEKFSKDYFLNRSTLVSVFLLIDASIPAKKIDLDYASWLGQNQIPMTLIFTKCDKRKKVKNGGKRPEENVNDFQDLIRGFFQTVPPWIMTSSVTHQGRDEILLHMAQLRNYWLKH* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3745 292 CDD YihA_EngB 111 285 IPR030393 GO:0005525
Lja1g3745 292 TIGRFAM GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 92 280 IPR019987 GO:0005525
Lja1g3745 292 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 53 289 - -
Lja1g3745 292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 288 IPR027417 -
Lja1g3745 292 Hamap Probable GTP-binding protein EngB [engB]. 97 286 IPR019987 GO:0005525
Lja1g3745 292 Pfam 50S ribosome-binding GTPase 112 229 IPR006073 GO:0005525
Lja1g3745 292 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 53 289 - -
Lja1g3745 292 Gene3D - 85 288 IPR027417 -
Lja1g3745 292 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 108 288 IPR030393 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3745 Lja-Chr1 46989231 46992519 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3745 K03978 - gmx:100800610 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3745 1 46989231 46992519 Lja1g3745 1 46989231 46992519 ECH