Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3727 ATGGGATCGTATATCCCGATTAAATCAATCACGATAGATCTTTCTGACTCTATTAATAAGAGAGATGAAAATTGCAAATGTGAACATTTCTCGATACGTGGATATGTGGCTGAAATGCGCAAGAAAGACTGGAAACTTTGTTGGCCATTCCCAGTACTTGACTCTGACAAGCCACCAATCCTTCCACCATTAGAGGTACGGAAATTCAAATGTTGGCGTTGCCCAGATGTTCTACAAGAAGTGGCTGGCGCAGACTTTCATAAAGATGATCAAACAGACTTAAATTGTCATAGTACTGAGTGCAAATCTGATCCCAACTGTAGTAATGCGCCTCTCAAGTCTGGTAATCAGCAAGATCCAGTGCCTGACACTCATGAGAGAGAAGAAATTGATCTTAATACAACTCTTAGCTGTCTCGATGGTTGCTTACCAATTAGTAATGAGAAAGAAAAGGAAGCCGGTGTTACACTTAACAGAATAACAGAGATTGAGGTTGGCTTGGGTGATAATCTCAATCACCAAGATTCTAATGTCCCATCATCTAAAAGTTATCCAGGCCTTGCCCAAGAAATGCACACAACTAACAATGGCTTTGAAGGTAATGGATTTTCTTATGTGCCGCCTGCTACCAATGTTGAATTCCAGGAAAAGGGTTCTGCTGATATTTGTAATGGAGGAACACCTTTGGCTGATAACCAGGGCCAGAAAAATTTAGTTAAAGCTTGTTCAGTTTTGGGGCAAGGAACAACAGTAATGGAGGCCGACAGTAAACATGATCCTACAAGCCGGCCTCCTCTTGAATTAGCTGCTTGTAATCAGGCCATGCCTGCTGGAAGTACGGATGATATGGATGAAAATGATGACAATATGGTTGAAGATGATTTAGAGGATCATCATTTAGAGAAGTCCACTAGTTTGTCTCGTAGAAGACCTCGGAAGGTGCGCTTGATGACTGACTTGTTAAGTGAAAATGGTGTAATGAGGACTGAGCAAATTGAAATCCGAGAATCCCCATCCAATGGTAATTCCAATGCTTCTGCATCTTCACAGGCACCCTCAATTTTACCAGGAAAGGTGGACATTCAAGGAGATTTAACTTTGACAAATACAGGTCAGAGTAGAAAAAGGAAGTCTCTCCAGGATGAAGTTTGGAGACCAGGTCAGAGAGCTAAAGTTGAAGTTCAGAACTTACAGCGAGATGCAACAACAACTGATACTGCTTTTGATACTAAATCCAATTCCAAAGATGTAATAGCAGGAGTGGGATTACAGGATGCTGCGAAGGGCCACTGGAGTAAACCTGAAACTGAAAGAAGCCATATCATGGGTAAAAAGAAGAACAAAAAGATTCTAGTTGTAGATAATTACTTGACTCCTGAGCCACAACAAGGGCAGCAAAGAGAAAATGAGGGCACTATGGATACTGCAGATAAGGCATATGCATCTAAAACTGTTTCCTCTAGAATAGCTCCTCGTGTGTTGACAGGGAAAAGGATGGACACTTTTCCTTCCCATGCCCTAAGAATAGAGAATGAGCTCAATTTGTCCAAAGAAAAGGGGAAGAAGCTGCAAACAGATTTTTTATCCTCCCAGAAAAATGGCATGCTTGTAGGACATACATTTGCACATTCAGGGAAAAACATCAGGTCCAGTATGCCTGTAGACATTCCAATTCCTTCAGTTCAGGGGGTGATGAATGGAAAAGGACTGGGCGAGGGGCCGCATCTTTCTCTCGACAGTTATTTGATTGCAAATTACAACAAAAAGTGTATCCATCAAACAGAAAATCGATTTCCTTTCTCTTTGCCATTTCAAGAGGGAACTTCGAAAGTACCTCAGTTTATTAGGAAAGACAATGAAACCAATGTTTTTCGAGGCCCAAGCATTCCTTCCAGGCACACACCAAATTCTATTTCTGGAAAGGGAATCCATTTTGAAGAAATGACTGGTGCAGGAAACAGAGAAAAAACTGTTGAAGCGGCGGAACAACTAGGTGTTATGAAACGATACGGTGAACGAAAGGCGGAGGTGTCTGAGCAGGGAACAGTAGATGATATACCCATGGAAATTGTGGAACTCTTAGCAAAGAATCAGTACGAGAGGTGTCTCCCTGATGTAGAAAATAGTTGCTCCACATTAGAGAAATCCTCTGTCAGAAGGAAATCACAGATGACAGCTGGCACTACTGGATACGGTAAAGGGGAGATGAGCTTCTCAAAAGAGTGCCAGAAGGAGAAACCTCAGGGAAGACCGAAGAAAAGTAACATTATCACAAGAGGAGAGAATGTGAAACCTAGCAAAAGAAATTCAGCTCATCACTTTCCTTCATTTGATGGAAACAATTCAGGTGTGAATAATCTATATCCACCTCAATCACCCTATGGATTTGAAGTTTCTCAGTCCCAAAAGAGGCCATCAAGTGGATTCCAATTTTCACCGGTTTCTAGCCAGCTTGGCAGTGCTAAAAAGTGCAAGTTTAGTGGGAGTCTTGAAGAGCGTGCACCCTCTAATGCTGCTTGGCAAGGCCTGGGAGGATGTAGCTTACACAAGAATATCTTATTACAGCAGAATGAATGGGCATCCTTGACCTCAAATCATGTTTCCATAGGGCATGTCCCCCAAAAGGTTGTTTCTCAGCCTACTAATAGTAACATGGACATAGCTTCACTCCGATCTGGTCTGCTTCATAAGCAGAACATGAAGAGGGATATTGATCTGAACTACATAAATATCAATGCTGCTGGCTTAGAAAAGCATAGTAGGAATGCAGGTACTGGGACCTTCAGCAGGATGAATGGAGAATACACATTTCCTTGTAAACATAATGGAATGGAGCCTCATCAAAATTCGAGGGGATCCCTGGATTTTTATTCTAACGAGACAATACCTGCCATGCATTTACTCAGCCTTATGGATGCAGGCATGCAGACGCGGACGCCCTTCAATGTGGGAGCAAGTGCTCAAATGCTTAAAAGACCCTCTTATCCCGGTGATTGCAATACTAAGTTGGAGATTGGTACATCTAAGGCCCATGATACCCTGAAAAGGCCACCACCTGATTATTACAGCAGAAGTTACTTATCTGATAAACCCCATGGTTGTTTTATTGGCTCTCCAACCTTTGGTGCTTCTGCATCAACCCAGCCCGATAAGAACTTAATAGGGGCTACCGGTTTCAATGGTGAAAATTCAACAAAGTTGGGAAAGAAAGAAAAGATGAAGAGCTCCAACTCAACCCTGCAGAATGTAGTTAGTAAGCCGTTTAGCTTGCCTCGTCTTGAAATGGAAACTTCACTGCAGCACAAATTAGACGCTCATGGCACTCAAGAAACCCCAGTGCCGTTAAATGTCATCTCTGGAAACTCATGTATGGTGAACAGAAATCCAGCTGACTTCACCACACCCGAAACAGGAAATGTCTATATGATCAGAGGAGAAGATCTGAAATTTGAGAAGGGTATTCCCAAAAACAAGTCTCACTTCCCCGTTCCAGATGGACACAAGCAGCAGAGGAACTCGAAGGGAGCTAAGATGAAAGAACATTCAAAACATTGA 3555 0.4239 MGSYIPIKSITIDLSDSINKRDENCKCEHFSIRGYVAEMRKKDWKLCWPFPVLDSDKPPILPPLEVRKFKCWRCPDVLQEVAGADFHKDDQTDLNCHSTECKSDPNCSNAPLKSGNQQDPVPDTHEREEIDLNTTLSCLDGCLPISNEKEKEAGVTLNRITEIEVGLGDNLNHQDSNVPSSKSYPGLAQEMHTTNNGFEGNGFSYVPPATNVEFQEKGSADICNGGTPLADNQGQKNLVKACSVLGQGTTVMEADSKHDPTSRPPLELAACNQAMPAGSTDDMDENDDNMVEDDLEDHHLEKSTSLSRRRPRKVRLMTDLLSENGVMRTEQIEIRESPSNGNSNASASSQAPSILPGKVDIQGDLTLTNTGQSRKRKSLQDEVWRPGQRAKVEVQNLQRDATTTDTAFDTKSNSKDVIAGVGLQDAAKGHWSKPETERSHIMGKKKNKKILVVDNYLTPEPQQGQQRENEGTMDTADKAYASKTVSSRIAPRVLTGKRMDTFPSHALRIENELNLSKEKGKKLQTDFLSSQKNGMLVGHTFAHSGKNIRSSMPVDIPIPSVQGVMNGKGLGEGPHLSLDSYLIANYNKKCIHQTENRFPFSLPFQEGTSKVPQFIRKDNETNVFRGPSIPSRHTPNSISGKGIHFEEMTGAGNREKTVEAAEQLGVMKRYGERKAEVSEQGTVDDIPMEIVELLAKNQYERCLPDVENSCSTLEKSSVRRKSQMTAGTTGYGKGEMSFSKECQKEKPQGRPKKSNIITRGENVKPSKRNSAHHFPSFDGNNSGVNNLYPPQSPYGFEVSQSQKRPSSGFQFSPVSSQLGSAKKCKFSGSLEERAPSNAAWQGLGGCSLHKNILLQQNEWASLTSNHVSIGHVPQKVVSQPTNSNMDIASLRSGLLHKQNMKRDIDLNYININAAGLEKHSRNAGTGTFSRMNGEYTFPCKHNGMEPHQNSRGSLDFYSNETIPAMHLLSLMDAGMQTRTPFNVGASAQMLKRPSYPGDCNTKLEIGTSKAHDTLKRPPPDYYSRSYLSDKPHGCFIGSPTFGASASTQPDKNLIGATGFNGENSTKLGKKEKMKSSNSTLQNVVSKPFSLPRLEMETSLQHKLDAHGTQETPVPLNVISGNSCMVNRNPADFTTPETGNVYMIRGEDLKFEKGIPKNKSHFPVPDGHKQQRNSKGAKMKEHSKH* 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3727 1184 MobiDBLite consensus disorder prediction 276 311 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 1153 1176 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 717 732 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 773 815 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 1153 1184 - -
Lja1g3727 1184 PANTHER PROTEIN EMBRYONIC FLOWER 1 1 1177 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 103 124 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 717 815 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 103 119 - -
Lja1g3727 1184 PANTHER PROTEIN EMBRYONIC FLOWER 1 1 1177 IPR034583 GO:0009910|GO:0045892|GO:0048367
Lja1g3727 1184 MobiDBLite consensus disorder prediction 327 387 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 333 355 - -
Lja1g3727 1184 MobiDBLite consensus disorder prediction 738 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3727 Lja-Chr1 46671892 46678151 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3727 - - gmx:100813480 1504.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3727 1 46671892 46678151 Lja1g3727 1 46671892 46678151 ECH