Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3725 ATGGCGATTAGGGTTTTCCTCCTCCTCCTCCTCCTTCTCTTTCTCTCGTTCACCAATCTCAGCTCTTCTCTTTACGAAGATCAAGTTGGCCTCGTCGATTGGCACCAACAGTACATTGGGAAAGTGAAGCATGCTGTGTTTCATACTCAGAAGACTGGGCGAAAGCGTGTTTTAGTTTCCACTCAAGAGAATGTCGTGGCTTCCCTCGACCTTCGTCACGGAGAGATTTTTTGGAGGCATGTTCTTGGGACCAATGATGTTATTGATGGAATTGATATTGCCCTGGGAAAATATGTCATTACTCTTTCCTCTGATGGAAGTATATTGAGAGCATGGAACCTACCTGATGGACAGATGGTTTGGGAGTCTTCCCTTCAGGGTTCAAAAACATCAAAGTCAATATTACACATTCCAAAGAATTTGAGAGCCGACAAGGATGATTTGATCCTTGTTTTTGGAAAAGGGTGTCTCCATGCTGTTTCTGGCATAGATGGTGAAGTTATTTGGAAGAAAGATTTCGCAGGTGAAAGCATTGAGATTAGCCAAGTTATTCAGTCTCCTGATGTGTTCTATCTAGCTGGTTTTGATGGTTCTTCAAAGTTTCATGTTTATGGATTGGATGCTAAGAATGGAGAGTTGTTAAAGAATAGTCATGCAGCACTTCCCTGTAGTACTTTTGGGGAATTATTACCGGTCTCAGGTGATAATTTTGTGATATTGGATGATACGAAGTCAAAGATTGTAACATTGAACATCAAGAATGGAGAGGTTAGCTACAACCAGAAGCATATTTCAGACCTCATCAAGGATTCATCTGGACAGGCAGTAATATTACCATCTAGGCTTCTAGGATTGTTTGCATTAAAAATCAATTCCCATGTTCTTTTAGTTAAAGTGACAAGTGAGGGTGAGTTGGTGGTGGTGGACAACATTAATAATGCAGCAGCTTTTAGTGATGCTTTGTCAATTTCAGAGGATCAACATGCATTTGCTTTTGTTCAATATGGAGACAACAAAATTCAACTCTCTGTAAAGGATGTTAATGATTGGAATAGTGATGTGATTAAGGAAAACATAGTAATAGACCATCAAAGAGGAAATATTGATAAGATTTTTATAAACAATTATGTGAGGACAGATAGATCTCATGGATTTAGAGCACTAATGGTAATGGAGGATCATTCACTATTATTGGTGCAACAAGGGGAAATTGTCTGGAGTAGAGAGGATGGCCTTGCATCAGTTGTAGATGTAACGACATCAGAACTGCCTGTGGAGAAGGAAGGTGTATCTGTGGCAAAAGTGGAACACAACCTCTTTGAATGGCTTCAGGGACATGTGCTGAAGCTCAAAGGAACATTAATGATTGCAAGCGCTGAGGATGTAGTAGCTATTCAAGCGCTGAGGTTGAGGAGTTCTGAAAAAAGCAAAATGACTCGTGATCATAATGGTTTTCGTAAGTTGCTTATAGTACTTACAAAGGCAGGAAAAGTTTTTGCTTTGCACACTGGAGATGGACGTGTAGTTTGGTCTATTCTTCTTCGTAATCTGCGTAAGTCAGAGGCGTGTGAGCGTCCAGTTGGGCTTAACATTTATCAGTGGCAGGTTCCGCACCATCATGCATTAGATGAAAATCCATCTATTCTTGTAGTTGGGCGATGTGGACCAAGTTTGACCGCACCAGCTGTTCTTTCTTTCATTGATGCATACACTGGGAAGGAACTCAACTCTTTGAGCCTTGCTCATACTGTTGCTCAAGTTATTCCTCTGCCTTATACTGATTCAACTGAACAGCGTTTGCATCTACTTATAGATACTAACCAACGGGCATATTTATACCCAAGAACTCCCGAGGCTTTTGACATTTTAAAACGTGAGTTTTCAAATGTATACTGGTACTCAGTTGAGGCTGATAATGGTGTTATTAGAGGTCATGCCTTGAAGACGAATTGTATTCATGACGTTGTGGATGAATACTGCTTTGTATTTAGGGACTTATGGACAATTGTGTTCCCATCTGAATCAGAAAAGATTATTGCAACAGTGACAAGAAAACCTAATGAGGTTGTGCATACTCAAGCCAAAGTTATGACTGACTACGATGTCATGTACAAGTATATATCAAAGAATATACTTTTTGTTGCAAATGTAGCACCTAAAGCCAGTGGGGAAATCAGAACATCAACCCCAGAGGAGGCATCTTTGGTCATCTATATCATCGATACTGTGACTGGTCGCATATTGCATCGCATGGCTCATCATGGTTGCCAGGGTCCTGTTCACGCCGTATTTAGTGAAAACTGGGTTGTCTACCACTATTTTAATCTCAGAGCACACAGATATGAGATGTCAGTTGTCGAGGTCTATGATCAGTCTCGGGCGGATAATAAGGAGATTTGGAAGTTTGTTCTCGGGAAGCATAATCTTACATCGCCCATCTCTTCTTATTATCGACCAGAAGTCGTAACAAAATCGCAATCATACTTTTTTACCCATTCTGTGAAAGCAATAGAAGTGACTTCAACCGCCAAGGGTATAACCTCTAAGCAGCTTCTTATTGGAACAATTGGTGATCAGGTTTTAGCTGTTGACAAACGTTTTTTGGATCCCCGGCGCACACTTAATCCCTCACAAGCTGAGAAGGAAGAAGGAATTATTCCTCTTACAGATTCACTACCAATCATTCCACAGTCCTACATCACACATTCCCTAAAAGTGGAAGGTCTCCGAGGTATAGTAACAGTGCCTGCCAAACTGGAGTCTACATCACTTGTCTTTGCCTATGGAGTAGATCTATTTTTTACCCAGATTGCTCCTTCTAGGACTTACGATTCACTAACAGAAGATTTCAGCTATGCTCTACTACTACTAACAATCGTAGCACTTGTAGCAGCAATATTTGCCACTTGGGTATTATCCGAGAGGAAAGATCTAGAAGAAAAATGGAGATGA 2952 0.4072 MAIRVFLLLLLLLFLSFTNLSSSLYEDQVGLVDWHQQYIGKVKHAVFHTQKTGRKRVLVSTQENVVASLDLRHGEIFWRHVLGTNDVIDGIDIALGKYVITLSSDGSILRAWNLPDGQMVWESSLQGSKTSKSILHIPKNLRADKDDLILVFGKGCLHAVSGIDGEVIWKKDFAGESIEISQVIQSPDVFYLAGFDGSSKFHVYGLDAKNGELLKNSHAALPCSTFGELLPVSGDNFVILDDTKSKIVTLNIKNGEVSYNQKHISDLIKDSSGQAVILPSRLLGLFALKINSHVLLVKVTSEGELVVVDNINNAAAFSDALSISEDQHAFAFVQYGDNKIQLSVKDVNDWNSDVIKENIVIDHQRGNIDKIFINNYVRTDRSHGFRALMVMEDHSLLLVQQGEIVWSREDGLASVVDVTTSELPVEKEGVSVAKVEHNLFEWLQGHVLKLKGTLMIASAEDVVAIQALRLRSSEKSKMTRDHNGFRKLLIVLTKAGKVFALHTGDGRVVWSILLRNLRKSEACERPVGLNIYQWQVPHHHALDENPSILVVGRCGPSLTAPAVLSFIDAYTGKELNSLSLAHTVAQVIPLPYTDSTEQRLHLLIDTNQRAYLYPRTPEAFDILKREFSNVYWYSVEADNGVIRGHALKTNCIHDVVDEYCFVFRDLWTIVFPSESEKIIATVTRKPNEVVHTQAKVMTDYDVMYKYISKNILFVANVAPKASGEIRTSTPEEASLVIYIIDTVTGRILHRMAHHGCQGPVHAVFSENWVVYHYFNLRAHRYEMSVVEVYDQSRADNKEIWKFVLGKHNLTSPISSYYRPEVVTKSQSYFFTHSVKAIEVTSTAKGITSKQLLIGTIGDQVLAVDKRFLDPRRTLNPSQAEKEEGIIPLTDSLPIIPQSYITHSLKVEGLRGIVTVPAKLESTSLVFAYGVDLFFTQIAPSRTYDSLTEDFSYALLLLTIVALVAAIFATWVLSERKDLEEKWR* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3725 983 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 55 586 IPR011047 -
Lja1g3725 983 Pfam PQQ-like domain 105 262 IPR002372 -
Lja1g3725 983 SMART ire1_9 230 262 IPR018391 -
Lja1g3725 983 SMART ire1_9 482 513 IPR018391 -
Lja1g3725 983 SMART ire1_9 183 218 IPR018391 -
Lja1g3725 983 SMART ire1_9 142 172 IPR018391 -
Lja1g3725 983 Gene3D - 21 335 IPR015943 GO:0005515
Lja1g3725 983 Pfam ER membrane protein complex subunit 1, C-terminal 765 982 IPR011678 -
Lja1g3725 983 PANTHER UNCHARACTERIZED 8 983 IPR026895 GO:0072546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3725 Lja-Chr1 46643029 46655251 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3725 K23562 - gmx:100807708 1729.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3725 1 46643029 46655251 Lja1g3725 1 46643029 46655251 ECH