Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3724 ATGGCATCAATTAGAAGAACCTCGTCTCCAGTGCATCGAGTTGGAACTGTAGCAAATTCCTCATCAAGTCCTCAGAATTCTCTACCATCCGGTGGGTTGTTATCTTCTTCGATCGCCTCACTTGACTCCCATGCGTTTGTGCTTGGCCAGATATGGAGAAAGGTGCTTTTCCATTTTTTCATTTGTTTTATGGTTGGTGCTTCTATTGGTTTCATCCCACTCGCTTTGACGAACTTGTCCATGGCTCTCATGCCAAAACATCAAGCCTTCTCTTTTGAGGTGATATCTGCAGTAAAAAATTTCCAGCTCCTTGAAAATGTGAAGATAAATGAGACACTATCAATTGAAGAGGCTGTAAAGTTCAATGCTACTGTGGATTCAGCAATGAAAGAGCAGGAACTTAAAGCTGAGGTAGCAATAGCATATAATATCTTCGGTAGCGAAAGCATTAATGGTCCTTATTTGGAGTCGCAGAAGCTTCTCATAATTGTAACCCCTACACACAATCATCCATTTCAAGCATATTACTTGAATCGCTTGTTGCAGACTCAAAAATTGGTCCCGCCTCCTCTGTTGTGGATTGTTGTTGAGATGCCTTCCCAATCTGAAGAAACTGCTGAAATCTTGAGGAGTAGTGGGATTATGTACAGGCATCTCATTTGCAAAACGAATCAAACCAACATGAACCATAGCAGCATTCTTCAAAGAAATGTTGCAATAGCTCACATTGAAACTCATCATCTGAATGGAATTGTCTACTTTGCAGATGATGATAATGTCTACTCAGTGGAGCTCTTTCAACAAATGAGAAAAATAAGGCGATTCAGAACGTGGACTGTAGCAAGACTATCAGGAGATAAAAGTAGCATTGTCTTGCAAGGGCCAATTTGTAATGGATGTCAAGTAATTGGATGGCACGAAAATGAATCAGATAAAAATTCTAAAAGATTCCATGCTGAAATGTCAGGTTTCGACTTCAATAGTACGATACTCTGGGATCCAAAGAAGTGGCACCGTCCCACTCTTGAACCTATCAGGCAGCTTGACTCAGTCGAGGAAAGTTTGTTGGTTAGTACATTGATTGAGCAGGTTGTTGAAGATGAAAGTCAAATGGAAGGCTTAGTGAACAACTGCTCTAGAGTTATGGTTTGGCATATTGATATTGAATCATCTTATTCCTCCTATCCTCAGAAATGGACTGCAAAGAACAACTTGGATGTCATTTTTCATCATCCACTTGAGTGA 1245 0.4032 MASIRRTSSPVHRVGTVANSSSSPQNSLPSGGLLSSSIASLDSHAFVLGQIWRKVLFHFFICFMVGASIGFIPLALTNLSMALMPKHQAFSFEVISAVKNFQLLENVKINETLSIEEAVKFNATVDSAMKEQELKAEVAIAYNIFGSESINGPYLESQKLLIIVTPTHNHPFQAYYLNRLLQTQKLVPPPLLWIVVEMPSQSEETAEILRSSGIMYRHLICKTNQTNMNHSSILQRNVAIAHIETHHLNGIVYFADDDNVYSVELFQQMRKIRRFRTWTVARLSGDKSSIVLQGPICNGCQVIGWHENESDKNSKRFHAEMSGFDFNSTILWDPKKWHRPTLEPIRQLDSVEESLLVSTLIEQVVEDESQMEGLVNNCSRVMVWHIDIESSYSSYPQKWTAKNNLDVIFHHPLE* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3724 414 CDD GlcAT-I 159 385 IPR005027 GO:0015018|GO:0016020
Lja1g3724 414 PANTHER BETA-1,4-XYLOSYLTRANSFERASE IRX9L-RELATED 47 408 - -
Lja1g3724 414 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 47 408 IPR005027 GO:0015018|GO:0016020
Lja1g3724 414 MobiDBLite consensus disorder prediction 1 28 - -
Lja1g3724 414 Pfam Glycosyltransferase family 43 180 389 IPR005027 GO:0015018|GO:0016020
Lja1g3724 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 160 407 IPR029044 -
Lja1g3724 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 160 404 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3724 Lja-Chr1 46629161 46631739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3724 1 408 Glycosyltransferase AT1G27600 43.541 9.74e-115 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3724 K20869 - gmx:100808765 590.497
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3724 1 46629161 46631739 Lja1g3724 1 46629161 46631739 ECH