Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3722 ATGGAAACCACCAAGCTCTGGAACTCTCCACACTTTCCTTTCCACCACCGCCAATGCCAATGCCATGCCAGACCCACACACCGCGTTTCTCTCAAACTTCCATTTCCATCAACACCACCACCACCACCACCTTCCCGCCTCCACGTAGCTCCCATTGCGTACTCGCCAACACCACCCAATCGAGACTTCGAACCCCTCATAGCGGGTAGGTACCATTTTGATGGTTCAGCTCGGAAATTCTTTGAGGGTTGGTACTTCAAGGTGTCGATTCCGGAGCGGAGGCAGAGTTTCTGCTTCATATGTATTCGGTGGAGAATCCTGCGTAGGCATGAACTCGTATTGGGGAACACTTTCGTGGCGAAACCAAATTCAAAACCTCCAAACAAGGAGGTTCCTCCTCAGGAATTTAATAATAGAGTGCTGGAAGGTTTTCAAGTCACTACCCTTTGGAATCAAGGTTTCATTTGCGATGATGGAAGGTCAAATTATGTAGAAACAGTAAAGACGGCTCGTTGGGAATATAGTACACGCCCTGTATATGGATGGGGTGATGTTGGGTCCACACAGAAGTCTACTGCTGGCTGGCTTGCAGCTTTTCCTGTTTTTGAGCCACATTGGCAAATATGCATGGGTGGTGGATTGTCAACAGGTTGGATAGAATGGGATGGCGAGAGGATTGAGTTTGAAAATGCCCCATCTTATTCAGAAAAGAACTGGGGCGGAGGATTCCCAAGAAAGTGGTTTTGGGTTCAATGTAATGTTTTTGAAGGTGAGGGTGCTAGTGGAGAAATTGCACTTACAGCTGCTGGTGGATTGAGGCAAATTCCTGGGATAACCGAGACCTTCGAAAATGCTGCACTGGTTGAATTAGAAGCAAAAACAGATGATCCCGGTACTCCATTGCGTGCGCCAACATCAGAAGCAGGCCTTTCACAAGCTTGTAAAGACACATGTTTCGGAATTCTTACATTGAAAATATGGGAACGAAGATATGATGGCAGCAAGGGGAAGATCATATTGGACGTTTCAAGTGACATGGCAGCTCTAGAAGTTGGAGGAGGTCCATGGTTCAGCACTTGGAAAGGCAAGACGACAATGCCACCGGTCATTGGCCCTGCTCTTGGATTACCCGTAGACCTAGATGGCATTTTTAATGCGGTTCCTCTGTTTAAACCACCTGGTTTGTGA 1188 0.4739 METTKLWNSPHFPFHHRQCQCHARPTHRVSLKLPFPSTPPPPPPSRLHVAPIAYSPTPPNRDFEPLIAGRYHFDGSARKFFEGWYFKVSIPERRQSFCFICIRWRILRRHELVLGNTFVAKPNSKPPNKEVPPQEFNNRVLEGFQVTTLWNQGFICDDGRSNYVETVKTARWEYSTRPVYGWGDVGSTQKSTAGWLAAFPVFEPHWQICMGGGLSTGWIEWDGERIEFENAPSYSEKNWGGGFPRKWFWVQCNVFEGEGASGEIALTAAGGLRQIPGITETFENAALVELEAKTDDPGTPLRAPTSEAGLSQACKDTCFGILTLKIWERRYDGSKGKIILDVSSDMAALEVGGGPWFSTWKGKTTMPPVIGPALGLPVDLDGIFNAVPLFKPPGL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3722 395 PANTHER - 52 100 IPR025893 GO:0009976
Lja1g3722 395 PANTHER - 288 395 IPR025893 GO:0009976
Lja1g3722 395 PANTHER - 108 288 IPR025893 GO:0009976
Lja1g3722 395 SUPERFAMILY AttH-like 81 267 - -
Lja1g3722 395 Pfam Tocopherol cyclase 287 353 IPR025893 GO:0009976
Lja1g3722 395 Pfam Tocopherol cyclase 78 100 IPR025893 GO:0009976
Lja1g3722 395 Pfam Tocopherol cyclase 109 281 IPR025893 GO:0009976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3722 Lja-Chr1 46568805 46575046 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3722 K09834 - gmx:100809310 565.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3722 1 46568805 46575046 Lja1g3722 1 46568805 46575046 ECH