Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3720 ATGGCAGGTGGTAGGAGAATCTTGTCCATGTTTCTTGTGGCATTTATGTGGATTAATGCCCAATATGCATTTGTAAGTTGTACTTTGACACCACAAGTGCAAAGAAAAATTGCTAGAGCCAATCAAAAGGGACCTTATCTTGGTCTGATCATACCAAATACTTTTGAACTAGACCCTCTTCTTCAGAATTCAGACTACACTCCAAGTAAACTCACCATAGACTTTGCTGGAAGGAGATTTCGATTTGGAGCCATTGGCCACAAGCCTGTTATACTGGTCATGACAGGAATGGGCATGATAAATGCAGGTGTAACTACTCAGCTTCTATTAAGCTTATTCACAGTTGAAGGAGTGGTGCACTACGGTGTTGCTGGAAATGCAAACCCATCCTTGCATATTGGAGATGTAGCCATTCCTCAATACTGGGCTCATTTAGCACTTTGGAGTTGGCAGAGGTATGGGCAAGGGCCTAATGATTCGTTACCCTTTGACTTCACAAAGGAAGTAGGATACTTAGAATTTGCCAATTACACCTCAAACTCATCTTCAAGTGTTGACAGTGATAACCAGCTCAACAATATCTGGTACGAACCAGAGGAAGTTTTTCCAGTTGATGGCATTCCAGAAGAGACCAAACATGCTCTTTGGGTCCCTGTAGATTCCAAGTACTACCACATTGCTCAAAAACTCAAGGGCTTGAAGCTAAAGGCGTGCATAAACTCAACGACATGCTTGTCCACTATACCAAAGGTGGAACTTGTTGATAGAGGAACAAGTGCGAGCATCTACCTAGACAATGTAGCATACCGAACCTTCCTCTACAACAAATTCAATGTGAGCCCAGTGGACATGGAAAGTGCATCAGTGGCTCTTATATGTTTGCAACAAAGAGTGCCATTCATTGTTTTCAGGGCTCTCTCCGACTTGGCCGGTGGCGGCTCCGCCCAGTCTAATGAGGCCGATACTTTCGCATCACTCGCCGCCACTAACTCTGTCACAGTGGTTGTTGAGTTTGTTAAGCTCTTGTCACTCCACCGCAAGAGGTGGAACATGTTATAG 1059 0.4419 MAGGRRILSMFLVAFMWINAQYAFVSCTLTPQVQRKIARANQKGPYLGLIIPNTFELDPLLQNSDYTPSKLTIDFAGRRFRFGAIGHKPVILVMTGMGMINAGVTTQLLLSLFTVEGVVHYGVAGNANPSLHIGDVAIPQYWAHLALWSWQRYGQGPNDSLPFDFTKEVGYLEFANYTSNSSSSVDSDNQLNNIWYEPEEVFPVDGIPEETKHALWVPVDSKYYHIAQKLKGLKLKACINSTTCLSTIPKVELVDRGTSASIYLDNVAYRTFLYNKFNVSPVDMESASVALICLQQRVPFIVFRALSDLAGGGSAQSNEADTFASLAATNSVTVVVEFVKLLSLHRKRWNML* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3720 352 Pfam Phosphorylase superfamily 47 339 IPR000845 GO:0003824|GO:0009116
Lja1g3720 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Lja1g3720 352 SUPERFAMILY Purine and uridine phosphorylases 48 342 IPR035994 GO:0003824|GO:0009116
Lja1g3720 352 CDD MTAN 47 338 - -
Lja1g3720 352 PANTHER BARK STORAGE-LIKE PROTEIN 6 346 - -
Lja1g3720 352 Gene3D Nucleoside phosphorylase domain 47 341 IPR035994 GO:0003824|GO:0009116
Lja1g3720 352 PANTHER PURINE NUCLEOSIDE PHOSPHORYLASE 6 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3720 Lja-Chr1 46532207 46534193 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3720 - - gsj:114415138 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3720 1 46532207 46534193 Lja1g3720 1 46532207 46534193 ECH