Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3719 ATGGAGAATGTGATAGAGGAACCACTTCTGAACAAGCACAACTCCAATGTCAAGGGTGGCTTCAGAACCATACCTTTCATCATAGCAAATGAGGCATGTGAGAGGCTTGCGAGTCTTGGGCTAATGCCTAACATGATATTGTACTTGACCAAAGTGTATGGCATGCAAACTGCTGAAGCAAGCAATTTCCTGTTACTTTGGTCGGCCGCCACAAATTTCATACCCCTCATTGGTGCTTTCCTGGCAGACTCCTATGTCGGTCGGTATCCCATGATTGGTTTTGGATCTATTGCTAGTCTACTGGGAATGGTTCTTCTATGGCTAACAACTCTATTTCCAACATCAAGGCCAATGTGTAACCAATTTGCCAACAGTTGCAGTTCCCCTACAACTATACAACTTTTGATCTTGCATTCTTCTTTTGCCCTAATGTCCATTGGAGCGGGAGGCATAAGATCATCTTCCTTAGCCTTTGGTATAGACCAGTTAAGTAAAAGGGACAAAGATGCAGGAATCAAAGAGAGCTACCTCAGCTGGTACTATGCTGCTGTGTCCGTGTCATCGCTGCTAGGTTTAAGTGTTGTTGTCTATATACAAGATAACATGGGGTGGAAAGTGGGATTTGGAGTTCCTGTTATCCTAATGTTTATAGCCACTGTCTCATTTTTCTTAGCAACACCATTTTATGTAATGCTGGAAGCTAAAAGGAACATCCTAAGTGGGTTAGCTCAGGTCTTTGTAGCTTCTTACAGAAATAGACTTCTGCAGTTACCACAGGAGGACAAGAATGGTATCTACCACCATGAGAAGGATTCCATTCTCCAAGTGCCAACTGACAAATTAAGGTTTCTCAACAAAGCATGCATAATTGGAAATCCCCTACAAGATCTAACACCCAATGGAAGAGCTTTGAATCCTTGGAATCTTTGTACAGTAGATCAAGTGGAAGACCTCAAGGCACTTCTAAAGATAATCCCAATCTGGACAACAGGAATCATGTTAACTGTGAATGTCAGTCAGGGTTCATTTCTGGTACTACAGGCATCCTCTATGGACCGCCACATTACTTCAAATTTTCAAGTTCCTGCAGCTTCCTTTGCAACATTTATGATTTTATCTTTAATACTTTGGGTTATACTTTATAATCAAGTTTTGGTCCCTGTGGCATCGAGGATAAAAGGGCGCCAAACACTCCTAGGTACGAAACAGAAAATGGGGGTAGGTCTTTTTTCTTGCTGCATATCAATTGCATCACTAGCCGTTGTTGAGAGCGTTAGACGCAAAATTGCTATTGAGCAAGGCTACTCAGAACAACCTCAGGCTGTGGTGAACATGTCTGCTATGTGGCTCTTGCCGCGCGAAATCCTCGATGGATTGGCTGAGGCAGCGAATGTGATCGGACAGATTGAGTTTTTTCTCACTGAGCTTCCTCAATCTATGTCTAGCGTGGCTTCGACTCTTGGTGGACTTGGGATGTCAGTGGGAAGTTTGGTAGCAAGTTTTGTTCTGAGTGCTGTTGATTCTGTTACTGGAGGCAGGGGAAATGAAAGTTGGCTTTCAAGCAACATAAACAAGGGTCACTATGACTACTATTATGGCATCATTTGTGCTTTGAGCATTGTAAATTTTGTGTATTTTCTTTACTGTAGTAAATCTTATGGTCCTTGTAAGGAAAGAGGAAAGTAA 1686 0.4241 MENVIEEPLLNKHNSNVKGGFRTIPFIIANEACERLASLGLMPNMILYLTKVYGMQTAEASNFLLLWSAATNFIPLIGAFLADSYVGRYPMIGFGSIASLLGMVLLWLTTLFPTSRPMCNQFANSCSSPTTIQLLILHSSFALMSIGAGGIRSSSLAFGIDQLSKRDKDAGIKESYLSWYYAAVSVSSLLGLSVVVYIQDNMGWKVGFGVPVILMFIATVSFFLATPFYVMLEAKRNILSGLAQVFVASYRNRLLQLPQEDKNGIYHHEKDSILQVPTDKLRFLNKACIIGNPLQDLTPNGRALNPWNLCTVDQVEDLKALLKIIPIWTTGIMLTVNVSQGSFLVLQASSMDRHITSNFQVPAASFATFMILSLILWVILYNQVLVPVASRIKGRQTLLGTKQKMGVGLFSCCISIASLAVVESVRRKIAIEQGYSEQPQAVVNMSAMWLLPREILDGLAEAANVIGQIEFFLTELPQSMSSVASTLGGLGMSVGSLVASFVLSAVDSVTGGRGNESWLSSNINKGHYDYYYGIICALSIVNFVYFLYCSKSYGPCKERGK* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3719 561 Gene3D MFS general substrate transporter like domains 7 559 IPR036259 -
Lja1g3719 561 CDD MFS_NPF1_2 24 553 - -
Lja1g3719 561 PANTHER PROTEIN NRT1/ PTR FAMILY 1.3 17 554 - -
Lja1g3719 561 Pfam POT family 92 518 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g3719 561 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 554 IPR000109 GO:0016020|GO:0022857|GO:0055085
Lja1g3719 561 SUPERFAMILY MFS general substrate transporter 22 550 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3719 Lja-Chr1 46514716 46530609 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3719 1 559 Organic Solute Cotransporters AT1G52190 52.098 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3719 K14638 - gmx:100809846 901.738
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3719 1 46514716 46530609 Lja1g3719 1 46514716 46530609 ECH