Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3717 ATGAGCTCCAGCATGCCTAGCTCTAAATGCTCAGTTCATCACCTAGGGAACATTGATGAGAATGCTCCTGCAGATTGGCCTGCATCATCTGGTGCTCAGCTTGATACTCCAACTGAATCTATGGAGTTCCTTGCTAGATCATGGAGTCTTTCAGCCATGGAACTCTCCAAAGCACTGCATAGCACCACCAATGTTAAGACCTCCACTGGTGTTGAGATGCCAAGTTCATGCCCTTCTGGTAATCAACTATGTACCACGGGTTCTGCTGCTTCAAAGAATTCTTTATCTGACAGCTCTTGCCCTCCAATTTCACCAAAAGACAGTGATGAAACGAAGGATTTATTTTTATTCCATCAAGCAATCAATCCAGAATTCCTTTACAGTCAGAACTTGCTGAGGAATGGGATTTACAAGGGATTGCTTAGAGGGAAGACAATGGGTAGGTGGATGAAAGACCAGAAAGAGAGGAAAAAGCAAGAAATTAGGAGCCAAAATGCTCAGTTGCATGCTGCAGTATCTGTGGTTGGTGTTGCTGCTGCTGTTGCAGCAGTGGTAGCATCAATAGCATCACCTGAAATGCCTAATGCCGACCAAAAGGACCCTACCATAGCTTCTGCTGCAATTGCATCTGCAGCAGCTTTAGTGGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGGGCTGAACATGACCAAATTATAACAGTAGTCGACTCTGCCATTAATGCAAAAACCAATGGAGATATTATGGCTCTAACAGCCGGAGCAGCCACAGCTTTGCGAGGAGCGGCTACTCTAAAGGCAAGGCTGCAAAAGGGGCTTGGAGCCACTGCAATTCCTCTAGTTGACGAGAAGCATGATCAAAGCAAAGAAGCAAACATTTTGACAGCACTGGACTGTGTCTTTAGAGGAGGACAACTTCTCAAACGTACAAGAAAAGGAGCTCTGCACTGGAAGCAAGTGTCTTTCAATATAAACTCAAATTTGCAGGTCGTCGCAAAAATGAAAAGCAAGCATATGGCAGGAACATTCACAAAAAAGAAGAAATATATAGTCACTGGAGTTGGCATTGATGTCCAAGCTTGGCCCGGAAGGGAGAAGGAAGACATCGGTGAAAAGAGGGCATACTTTGGAATAAAAACAGCAGACAGGATAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACAGTTCTGGCTTGAGGGGATCCAGCACATATTAAATTGCAGTGCCAAAGTAGCATAA 1245 0.4434 MSSSMPSSKCSVHHLGNIDENAPADWPASSGAQLDTPTESMEFLARSWSLSAMELSKALHSTTNVKTSTGVEMPSSCPSGNQLCTTGSAASKNSLSDSSCPPISPKDSDETKDLFLFHQAINPEFLYSQNLLRNGIYKGLLRGKTMGRWMKDQKERKKQEIRSQNAQLHAAVSVVGVAAAVAAVVASIASPEMPNADQKDPTIASAAIASAAALVASHCIEIAEDMGAEHDQIITVVDSAINAKTNGDIMALTAGAATALRGAATLKARLQKGLGATAIPLVDEKHDQSKEANILTALDCVFRGGQLLKRTRKGALHWKQVSFNINSNLQVVAKMKSKHMAGTFTKKKKYIVTGVGIDVQAWPGREKEDIGEKRAYFGIKTADRIIEFECGSKGDKQFWLEGIQHILNCSAKVA* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3717 414 Pfam Plant pleckstrin homology-like region 306 410 IPR013666 -
Lja1g3717 414 ProSiteProfiles PH domain profile. 300 408 IPR001849 -
Lja1g3717 414 PANTHER EXPRESSED PROTEIN 8 412 IPR040269 -
Lja1g3717 414 Pfam Auxin canalisation 35 280 IPR008546 -
Lja1g3717 414 SUPERFAMILY PH domain-like 289 407 - -
Lja1g3717 414 Coils Coil 151 171 - -
Lja1g3717 414 Gene3D - 284 413 IPR011993 -
Lja1g3717 414 MobiDBLite consensus disorder prediction 1 34 - -
Lja1g3717 414 PANTHER PHOSPHOINOSITIDE BINDING PROTEIN 8 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3717 Lja-Chr1 46498839 46502300 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3717 - - gmx:100814154 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3717 1 46498839 46502300 Lja1g3717 1 46498839 46502300 ECH