Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3707 ATGGGTAAAGATTTTATGTCCTTGTTTCGACGCGAAAGAAAGAGACTGTTGTGGCTTGTAGGCATTACATTTGCAGTGATTTTAGCATTGCAGTGTTTTGAGCTTCCTTATGGTAGCCTTCAACCTTCTGTATTCTCTTCTGACAAGTTACCAGCATCTGATAGTAGTGCAGATCCACCATCTGTGTCTGAAATGTCAGTTTTGAATCAACAAAATTCTACTGTTGAACATTTACATCCCATTGAGACAGTTAATAAAACTAAGATCTCTGAGGAAAAGGACACTATTTCAGGAACTGGTTACATGTCAGAACAAGGAACGGTATCAAACAAATCTTTAGGATTTGATGAGTCCGATGGAAGTTCTGCAGTGTTATCAGAAAATAGTGATAACAATTCTATTGGTGTGAATTTGACTAGAGAGGTTAACATTACATCAGGGTCAGATCATAAATTGGAAACTTCAGATGCTAATTTTCATTCCCCTTCTCACGCAATACCACCAACATATTTGACTCCGCCTATAACTACGCCTCCGGTGTTATCAAATGATTCTGAAGAAATTGATTTCACTGAGGGTGAGAGGGAAAAACCATCACAAGATGATGTGGATGCAGTGAGCAAGAATTCTTCTATCACCAGTGTGCATAAGGAGACTAAAGATTCTCATTTACCAGTTCCAGAAGTAACATCAATCTCTGAAATGAACACGTTATTGCTTCAAAACCGTGCCTCATATCGTTCTATGAGGCCAAGGTGGTCTTCAGCTGTTGATCAAGAGCTACTGCGGGTCAGATCAGAGATTGAGAACGCACCAAACCTAGAGAATGTTGAAAATCTTTATGCACCCCTTTTTCGAAATGTTTCCATGTTCAAGAGGAGCTATGAATTAATGGAAAAGACACTCAAAGTGTATGTGTATAGAGAAGGGGCTAAGCCTATTATGCACTCACCATATCTTTTGGGAATTTATGCTTCAGAGGGATGGTTCATGAGGTTAATGGAAGTTAATAAAGGATTTCTTACTAAAGATCCAAAGAAGGCACACCTGTTCTACTTACCTTTCAGTTCAAGAATGCTGGAGGAAACTTTGTATGTGCGGAATTCACATAATCATAAAAACCTGATTCAGTATCTGAATGATTATGTAGACATGATTGCTGGGAAACATCCTTTCTGGAACAGAACAGGAGGTGCTGATCATTTTCTGGTTGCTTGCCATGATTGGGCCCCTACAGAAACAAAGCATCACATGGCTAAGTGCATAAGAGCCCTATGCAACTCTGATGTCAGAGAAGGATTTGTCTTGGGGAAGGACGTGTCCCTTCCTGAAACATATGTCCGGAATGCTCAGAAACCCACTAGAGACCTTGGTGGAAAAACAGTTTCACAGAAGAAAACTCTAGCGTTTTTCGCCGGCGGCATGCACGGTTATGTTCGACCGATCCTTCTGCAACACTGGGAAAACAAAGACCCTGACATGAAAATCTTTGGAGTTTTGCCGAAGTCTAAGGGAAACAGGAACTACATCCAGTACATGAAGAGCAGCAAGTATTGCATTTGTGCAAAGGGGTATGAAGTTAACAGTCCAAGAGTTGTTGAGGCCATCTTCTATGAATGTGTTCCTGTTATCATATCAGACAATTTTGTGCCTCCATTTTTTGAGGTTTTGAATTGGGAATCCTTTGCTGTTATTATTTTGGAGAAGGATATTCCAAATTTGAAGAGTATACTACTCTCTATTCCTGAGAAGAGGTATCTTCAAATGCAAATGAGGGTGAAGAAAGTACAGCAACATTTCCTTTGGCATAGGAACCCTGTCAAGTATGATATATTTCACATGACACTTCATTCTATTTGGTACAATAGAGTTTTCACTGCCAGAGCTAGATGA 1893 0.3994 MGKDFMSLFRRERKRLLWLVGITFAVILALQCFELPYGSLQPSVFSSDKLPASDSSADPPSVSEMSVLNQQNSTVEHLHPIETVNKTKISEEKDTISGTGYMSEQGTVSNKSLGFDESDGSSAVLSENSDNNSIGVNLTREVNITSGSDHKLETSDANFHSPSHAIPPTYLTPPITTPPVLSNDSEEIDFTEGEREKPSQDDVDAVSKNSSITSVHKETKDSHLPVPEVTSISEMNTLLLQNRASYRSMRPRWSSAVDQELLRVRSEIENAPNLENVENLYAPLFRNVSMFKRSYELMEKTLKVYVYREGAKPIMHSPYLLGIYASEGWFMRLMEVNKGFLTKDPKKAHLFYLPFSSRMLEETLYVRNSHNHKNLIQYLNDYVDMIAGKHPFWNRTGGADHFLVACHDWAPTETKHHMAKCIRALCNSDVREGFVLGKDVSLPETYVRNAQKPTRDLGGKTVSQKKTLAFFAGGMHGYVRPILLQHWENKDPDMKIFGVLPKSKGNRNYIQYMKSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLNWESFAVIILEKDIPNLKSILLSIPEKRYLQMQMRVKKVQQHFLWHRNPVKYDIFHMTLHSIWYNRVFTARAR* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3707 630 MobiDBLite consensus disorder prediction 188 203 - -
Lja1g3707 630 Pfam Exostosin family 299 579 IPR040911 -
Lja1g3707 630 MobiDBLite consensus disorder prediction 111 133 - -
Lja1g3707 630 MobiDBLite consensus disorder prediction 149 224 - -
Lja1g3707 630 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 179 626 IPR004263 GO:0006486|GO:0016757
Lja1g3707 630 PANTHER EXOSTOSIN FAMILY PROTEIN 179 626 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3707 Lja-Chr1 46427066 46430944 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3707 - - gmx:100818271 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3707 1 46427066 46430944 Lja1g3707 1 46427066 46430944 ECH