Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3706 ATGGATCGTGGATTTAGATTTTTGTGTCAGGCAGAAACAAAGAGATTGATTTCATTCTTAGGAATAGCTGTAGCTCTAGTTCTAGTTGTTCAGTATTCTGAGCTTCCAAATAGTAAATTGTTATCTTCTCTCACTGCTAAGATCACTAGTTTCACAATGGATATATCTTCAGTTAATTCTAGAATGGAGGGTAATGACATGCACCTAAATGATTCAAATTCAAGCTCTGAACATGTACCAAGTAGTCCTCAGTATACCCCATTAGATCAAGTTAGTGCTTCAATTAATGCCCCTGCTCCAGAGAATGTTAAAGGGCTTGGTAGTGTTGTTATCCTTAATAATTTCACAACTAGAGATGATGGTAATTCACCAATGGGTAGTGTTGAGGGAAAAGAAAAAGATACTAATTTGACATCACAAGGGGTTGCATCTTCCCTGCTTGCACCACAACCTATGGTTCCATTGCCCAACAGAACAACATCCTTGGATTCAGAAATAGATTCTAGAAGTCCCATGATATCTGTCATTTCCTCTGCAACTTCATTGGAGTCAAACATGAGTGATCCGGTCCGCAAGGATGGAAACTCAGGTTCTTTGCAAGGTAGTGGTGTGACACTCGGTAACGGGAAGCCAGTGAGTACAAAGAATTCCAAAAAGAAGTCATCTAAAGTAGTTCCAATATCCGAGATGAACTTACTGTTGCAGCGCAGTCACGCTTCTTCCCAGATAGCGTCAGCAGAGCTTTCAGCTGTTGATCTGGAAATATTGCATGTAAAGTCAGAGATTGAAAATGCACCTCTCATTATGAATGATTCAAGACTTTACTCCCCTTTATACAGGAACATTTCCATGTTCAGAAGGAGTTATGAACTAATGGAGAAGATGCTCAAAGTTTACATCTACCAGGATGGGGACAGACCAATCTTTCATGAGCCCTTACTGGATGGAATATATGCATCTGAAGGGTGGTTCGTGAAATTAATGGAGGAAAACAAACAATTTGTGTCTGGCGACCCCAGTAAGGCTCACTTGTTTTACATACCTTTCAGTTCAAGATTGTTGCAGTTAACTCTCTATGTTAAAAATTCACACAGACGTTCAAACTTAATTGAGTACATGAAAAATTATGTGGACAAGATTGCTGGAAAGTACCCTTTCTGGAATAGAACAAATGGAGCAGATCACTTTGTTGTTGCTTGCCATGATTGGGCTCCTGCAGAAACGAGAGGCCGCATGCTTAATTGCATTAGAGCCCTCTGCAACGCTGACATTGAAGTAGGATTCAAGATAGGAAAGGATGTTTCTCTTGCAGAAACATATATAAGATCAGTTGAGAATCCTGTCAAAAACATAGGGGGAAACCCTCCTTCTCAGAGGTCTATCCTGGCTTTTTTCGCCGGTGGTTTGCACGGTTATGTTCGGCCTGTTTTGTTGAAGCACTGGGAGAACAAAGAACCTGACATGAAAATATTTGGTCCATTGCCGCATGTCAGGGGTAATGCCAACTACCTCCAGTTCATGAAGAGCAGCAAATTCTGCATATGTGCAAGAGGTCATGAAGTTAATAGCCCGCGCGTGGTTGAGGCTCTACTCTATGAATGCGTTCCGGTTATCATATCTGACAATTTTATTCCGCCTTTGTTCGAGGTTTTAAACTGGGAATCTTTTGCTGTGTTTGTGATGGAGAAAGATATCCCTGATTTGAGGAACATCCTGCTTTCTATATCGGAAGAAAGGTACTTAGAGATGCATAAGCGGGTGAAAAAGGTACAAGAGCATTTTCTCTGGCATCCTGAGCCAGTAAAGTATGATTTGTTTCACATGCTTCTTCATTCAATTTGGTACAATAGACTTTTCCGAGTAGGTCAGAAGTGA 1875 0.4085 MDRGFRFLCQAETKRLISFLGIAVALVLVVQYSELPNSKLLSSLTAKITSFTMDISSVNSRMEGNDMHLNDSNSSSEHVPSSPQYTPLDQVSASINAPAPENVKGLGSVVILNNFTTRDDGNSPMGSVEGKEKDTNLTSQGVASSLLAPQPMVPLPNRTTSLDSEIDSRSPMISVISSATSLESNMSDPVRKDGNSGSLQGSGVTLGNGKPVSTKNSKKKSSKVVPISEMNLLLQRSHASSQIASAELSAVDLEILHVKSEIENAPLIMNDSRLYSPLYRNISMFRRSYELMEKMLKVYIYQDGDRPIFHEPLLDGIYASEGWFVKLMEENKQFVSGDPSKAHLFYIPFSSRLLQLTLYVKNSHRRSNLIEYMKNYVDKIAGKYPFWNRTNGADHFVVACHDWAPAETRGRMLNCIRALCNADIEVGFKIGKDVSLAETYIRSVENPVKNIGGNPPSQRSILAFFAGGLHGYVRPVLLKHWENKEPDMKIFGPLPHVRGNANYLQFMKSSKFCICARGHEVNSPRVVEALLYECVPVIISDNFIPPLFEVLNWESFAVFVMEKDIPDLRNILLSISEERYLEMHKRVKKVQEHFLWHPEPVKYDLFHMLLHSIWYNRLFRVGQK* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3706 624 MobiDBLite consensus disorder prediction 117 136 - -
Lja1g3706 624 Pfam Exostosin family 293 573 IPR040911 -
Lja1g3706 624 MobiDBLite consensus disorder prediction 62 88 - -
Lja1g3706 624 MobiDBLite consensus disorder prediction 181 221 - -
Lja1g3706 624 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 169 621 IPR004263 GO:0006486|GO:0016757
Lja1g3706 624 PANTHER GLYCOSYLTRANSFERASE PLANT-LIKE PROTEIN 169 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3706 Lja-Chr1 46422518 46426463 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3706 - - lja:Lj1g3v2067550.1 1215.68