Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3699 ATGGCCCAGCTCTTCAGAGACCTCTCATTAGGCCAATCCAAGCGTGATTCCCACGCGCCGCCGCCAACAATAACAATGCCTCCCAAACCAATCGCCGACGACCTCCCCTCCCCACTCGGCCAACTCGCCGCTACTCTCTCCGATTCCGACCTCTCCCTCACCGCCTACGAGATCTTCGTCGCCGCCTGCCGCACCTCCTCCGGGAAGCCACTCAGCTTCGTTCCCAACAACTCCGACTCTCCGAGTCAAAACTCCCCGGCCTACCAGCGATCTCTTACCTCCACGGCCGCCAGCAAGATGAAAAAGGCGTTCGGCTTGAAATCGCCCGGGTCGGGTGGCCGGAAGAGCCCTGGCTCTTCCGGTTCCGGGTCGGGTCAGGGTAAGACGAAGCGGCCAATGACGGTTGGTGAGCTCATGAGGAATCAGATGAGGGTTTCTGAAGCCATGGATTCGCGTGTGCGCCGTGCGCTCCTTAGAATCTCTGCTGGCCAGGTTGGAAGGAGGATTGAGTCGGTGGTCGTGCCACTTGAGCTGTTGCAGCAACTCAAGTCTTCGGATTTTACTGATCAACAAGAGTATGTGGAGTGGCAGAAGAGGACCCTCAAGGTTTTGGAGGCGGGTCTGATTTCGCATCCTTACATGCCTCTGGACAAATCCAATTCTTCTGCGCAGCGGCTGCGACATATTATTCATGCTGCTATTGATAGGCCTTTAGAGACTGGGAGGAATAATGAGTCTATGCAGGTTCTTCGTAGCGCTGTCATGTCTCTTGCGAATAGGTCGTATGATGGCTCTCTCACTGATTCTTGCCACTGGGCAGATGGGATTCCTCTGAATCTCCGGCTTTATGAAATGCTTCTGCGGTCCTGCTTTGATGCTAATGATGAATCGTCAATTATTGAGGAAGTTGATGAGCTAATGGAGCAGATTAAGAAGACTTGGGGAATCCTTGGATTGAACCAGACACTCCATAATCTCTGTTTTACTTGGGTTTTATTTCATCAGTTTGTTGCGACTGGCCAGGTGGATTTGGAACTGCTGTCTGTTGCTGATGGCCAGCTAGCTGAGGTTGCAAAAGACGTAAAGACGACAAAAGATGCAGAATACTCCAAAATTTTGAGTTCTACATTGACTTCAATTTTGGGATGGGCTGAGAAAAGGCTTCTTGCCTATCATGAAACTTTTGATCGTGGAAACATTGAAACCATGGAGGGCATTGTCTCTTTAGGGGTAGCGGCAGCTAAGATTTTGGTTGAAGATATATCTAATGAGTATCGCCGGAGGAGAAGAACTGAGGTCAATGTGGCCCGGGAAAGAATTGAAACTTACATCAGATCATCACTGCGCACTGCCTTTGCCCAGATAATGGAGAAATCAGATTCAAGCAGGAGAGCTTCAAGGAATCAGCCAAATTCTCTCCCTGTCCTTGCTATTCTTGCAAAGGATGTGGGTAGCCTGGCAGTTAATGAAAAGCAAGTGTTCAGTCCAATATTTAAGAGATGGCATCCCTTGCCCGCAGGTCTTGCTGTGGCCACCCTCCACTCATGTTATGGAAATGAATTGAAGCAATTCATTTCAGGCATCACAGAGTTGACACCTGATGCTGTTCAAGTGTTAAGAGCGGCAGACCAATTGGAGAAAGACCTTGTGCAGATAGCAGTTGAGGATTCAGTGGACAGTGATGATGGTGGTAAGGCAATAATCCGTGAGATGCCTCCTTTTGAGGCTGAAGGTGCAATTGCCAATCTTGTGAAAATATGGATTAAGACTAGATTAGACAGACTGAAAGAATGGGTTGATAGAAATCTGCAGCAAGAGCTTTGGAGTCCAAACTCAAATCAGGAAGGATATGCCCCATCTGCTGTTGAAGTATTGCGAATCATGAATGAAACTTTGGATGCATTCTTTCAGCTTCCAATACCAATGCATCCTGCATTACTTCCGGAAGTGATGAATGGCCTTGATAGATGCCTTCAGTACTATGTTATCAAATCTAAATCAGGCTGTGGATCACGAAATACTTTTGTTCCAACAATGCCCGCGCTGACCAGATGCACTATTGGCTCAAAGTTTCAAGGCTTTGGGAAGAAGAAAGAAAAATCTCCAAATTCTCAAAAGAGAAACCCTCAGGTTGCAACAAATGGAGATAGCTCTTTTGGGATCCCACAGCTCTGTGTTCGCATAAATACTTTGCAATGGATCTTGGGTGAATTTGATGTTCTGGAAAAAAGAATAATTACTCTTTTACGAAACTCTGAATCTGCTCATGCAGAAGATTTTTCAAACGGATTAGCGAATAAGTTTGAACTCTCTCCATCTGCCTGTCTTGAAGGAATTCAGCAACTCTGCGAGGCCGCAGCTTATAGAGTTGTCTTCCGTGATCTAAGCCATGTTTTATGGGATGGTTTGTATGTCGGGGATCCATCATCTTCCAGAATTGAGCCATTTATTCAGGAACTTGAGCGGAACTTAATGTACATATCAGACACCGTTAATGAAAGAATTCGCACGCGCATTATTTCTGAAATAATGAGAGCTTCCTTTGATGGATTCTTGCTTGTATTGCTTGCTGGAGGCCCGGCTCGTGCCTTTTCCCGAAAGGACTCTCAAATCATAGAGGATGATTTCAAATTACTTAAGGAGCTTTTTTGGGCAAATGGGGATGGCTTGCCTTCTGAATTAATAGACAAGTTGTCAGCTACTGTGAGGTCAGTCCTTCCTCTTTTCAGAGCCGACACAGAGAGCATCATTGAGCAGTTTAGACGGTTAACACTGGAGACATACAAATCCAATGCTAGGTCTAGGCTTCCATTACCTCCAACTTCTGGACAGTGGAGTCCATCCGAACCAAACACATTACTACGTGTTTTATGCTATAGAAATGATGATTCAGCTTCTAAGTTTCTTAAAAAGACATATGATCTCCCTAAGAAACTTTAA 2940 0.4622 MAQLFRDLSLGQSKRDSHAPPPTITMPPKPIADDLPSPLGQLAATLSDSDLSLTAYEIFVAACRTSSGKPLSFVPNNSDSPSQNSPAYQRSLTSTAASKMKKAFGLKSPGSGGRKSPGSSGSGSGQGKTKRPMTVGELMRNQMRVSEAMDSRVRRALLRISAGQVGRRIESVVVPLELLQQLKSSDFTDQQEYVEWQKRTLKVLEAGLISHPYMPLDKSNSSAQRLRHIIHAAIDRPLETGRNNESMQVLRSAVMSLANRSYDGSLTDSCHWADGIPLNLRLYEMLLRSCFDANDESSIIEEVDELMEQIKKTWGILGLNQTLHNLCFTWVLFHQFVATGQVDLELLSVADGQLAEVAKDVKTTKDAEYSKILSSTLTSILGWAEKRLLAYHETFDRGNIETMEGIVSLGVAAAKILVEDISNEYRRRRRTEVNVARERIETYIRSSLRTAFAQIMEKSDSSRRASRNQPNSLPVLAILAKDVGSLAVNEKQVFSPIFKRWHPLPAGLAVATLHSCYGNELKQFISGITELTPDAVQVLRAADQLEKDLVQIAVEDSVDSDDGGKAIIREMPPFEAEGAIANLVKIWIKTRLDRLKEWVDRNLQQELWSPNSNQEGYAPSAVEVLRIMNETLDAFFQLPIPMHPALLPEVMNGLDRCLQYYVIKSKSGCGSRNTFVPTMPALTRCTIGSKFQGFGKKKEKSPNSQKRNPQVATNGDSSFGIPQLCVRINTLQWILGEFDVLEKRIITLLRNSESAHAEDFSNGLANKFELSPSACLEGIQQLCEAAAYRVVFRDLSHVLWDGLYVGDPSSSRIEPFIQELERNLMYISDTVNERIRTRIISEIMRASFDGFLLVLLAGGPARAFSRKDSQIIEDDFKLLKELFWANGDGLPSELIDKLSATVRSVLPLFRADTESIIEQFRRLTLETYKSNARSRLPLPPTSGQWSPSEPNTLLRVLCYRNDDSASKFLKKTYDLPKKL* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3699 979 PANTHER ELONGATION FACTOR TS (DUF810) 2 979 - -
Lja1g3699 979 MobiDBLite consensus disorder prediction 693 715 - -
Lja1g3699 979 MobiDBLite consensus disorder prediction 73 98 - -
Lja1g3699 979 PANTHER PROTEIN UNC-13 HOMOLOG 2 979 IPR008528 -
Lja1g3699 979 MobiDBLite consensus disorder prediction 73 135 - -
Lja1g3699 979 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 810 920 IPR014772 -
Lja1g3699 979 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 536 679 IPR014770 -
Lja1g3699 979 MobiDBLite consensus disorder prediction 1 39 - -
Lja1g3699 979 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3699 Lja-Chr1 46288279 46293464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3699 - - gmx:100814675 1673.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3699 1 46288279 46293464 Lja1g3699 1 46288279 46293464 ECH