Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3697 ATGGACGAATCCAATTCTAGTAACTCCACCACATCTAGCCGTAACAACCACCGCCACCACCACCACATTCGCGATCATATCATCCCTCGCCGCAGACTCAGCCAACCCATTTCCGACCGAATAGTCCGCGCCCTCCGCCACCGCCTTCGTCTCCTCCACCGCTCTGCCTCCACCTTCTTCATCCTCGGTGCCACTGGAAACGTCTACACCGTGACACTAACCTCCTCGCCTTCCTGCACCTGCCCTGACCGCACAACCCCCTGCAAGCACATCCTATTCGTCTTGATCCGCGTCCTCGGCGTGCCCCTGGAAGACACGATTCTCCGGCGGAAGACGCTCAGGCCATGTCACCTTCAACGCCTCCTGAGCGAGCCAACGTCGTCGGAGGCGCTTGCAGGGGACACGCTGAGACAGAGGTTCCACCAGCTTTTCTTCGGCGGAGGGAAGGGAGGGACGGAGACTGTGGTGCCGGAGGAGGGTGCGTCGTGCCCGATTTGCCTTGATGAGATGGGGAAGGAGGGGAAGTTGGTGGCTTGCGGGACTTGCCGGAATGCTGTTCATGAAGAGTGCTTTGTTCGGTGGAGGAGGAGCAAGGTGAGTGGAGCGACGAGGTGTGTGATTTGCAGAGCGAGGTGGAGGAACAGGGCGGAGCAGGATGAGTATCTGAACTTGTCTGAATATCTTAGTGATGAAGATGTTGCTGATAGGGATTACTGCCCTGCATGGGTGGCTAACTCTCTTTCCTTAGATGGTTGA 756 0.5767 MDESNSSNSTTSSRNNHRHHHHIRDHIIPRRRLSQPISDRIVRALRHRLRLLHRSASTFFILGATGNVYTVTLTSSPSCTCPDRTTPCKHILFVLIRVLGVPLEDTILRRKTLRPCHLQRLLSEPTSSEALAGDTLRQRFHQLFFGGGKGGTETVVPEEGASCPICLDEMGKEGKLVACGTCRNAVHEECFVRWRRSKVSGATRCVICRARWRNRAEQDEYLNLSEYLSDEDVADRDYCPAWVANSLSLDG* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3697 251 Pfam SWIM zinc finger 69 97 IPR007527 GO:0008270
Lja1g3697 251 Pfam Ring finger domain 162 209 IPR001841 -
Lja1g3697 251 SUPERFAMILY RING/U-box 157 215 - -
Lja1g3697 251 ProSiteProfiles Zinc finger RING-CH-type profile. 155 215 IPR011016 GO:0008270
Lja1g3697 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 151 225 IPR013083 -
Lja1g3697 251 PANTHER - 20 232 - -
Lja1g3697 251 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 20 232 IPR039903 GO:0061630
Lja1g3697 251 ProSiteProfiles Zinc finger RING-type profile. 163 209 IPR001841 -
Lja1g3697 251 MobiDBLite consensus disorder prediction 14 28 - -
Lja1g3697 251 MobiDBLite consensus disorder prediction 1 29 - -
Lja1g3697 251 ProSiteProfiles Zinc finger SWIM-type profile. 69 99 IPR007527 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3697 - - gmx:100775505 312.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3697 1 46273083 46273838 Lja1g3697 1 46273083 46273838 ECH