Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3696 ATGTTCTCAATATCTGTTTGCGCAGCGCATAAGATAGAAGGAAGAAGAAGAAGAGCATATCAATTCAACTTCAAATTTTCGACCTTTCCCCATTCGTGCCCATCACCGAGAAAGTGTAAACTTCCAATGTTCCCTTCAATCCTAAATTCTAAGCAACCTCAGGAACAGCAGCAACGAAAGCAAAAGGGAGAATGGTTAGCAGGAAGTTTCAAGCCAGAGAATTTCATTCCAGGTCTTATCATAGGTTTCATTTTTGGGATGTTTTTAGATTTATCAAAGCCCCATAGAAATCTCTTGTCCAAGAAAATATTCTCACCTAGCAAGGTTCAACAGCACCTCACACTCTCAGGCAATGGCGATAGGGAGTTTAAAATGGTTCTGGTTGTTAGGCAAGACCTAAAGATGAAATCTGGAAAGATTGCATCCCAATGTGCTCATGCTGCCACTGGCATGTATGCTGAATTGATGCAAAGTGACCGGTCTCTTTTGAGACAATGGGAACAGTGCGGCCAGCCAAAAATTGTTGTGACCTGTAGGAACCAACAAGAAATGAATAAGCTGAAGGAAACTGCTGAGAGTATCGGCCTTCCTACTTTTGTTGTTGCCGACGCTGGACGAACAGAGGTTTCGGCAGGATCAAAGACTGTTCTTGCTGTAGGACCTGGGCCAAAAGCATCTGTGGATTCGGTGACTGGAAGATTGGCCCTGCTTTGA 714 0.437 MFSISVCAAHKIEGRRRRAYQFNFKFSTFPHSCPSPRKCKLPMFPSILNSKQPQEQQQRKQKGEWLAGSFKPENFIPGLIIGFIFGMFLDLSKPHRNLLSKKIFSPSKVQQHLTLSGNGDREFKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCRNQQEMNKLKETAESIGLPTFVVADAGRTEVSAGSKTVLAVGPGPKASVDSVTGRLALL* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3696 237 Gene3D Bit1 119 237 IPR023476 -
Lja1g3696 237 PANTHER PEPTIDYL-TRNA HYDROLASE 2 50 237 IPR002833 GO:0004045
Lja1g3696 237 CDD PTH2 123 237 IPR002833 GO:0004045
Lja1g3696 237 SUPERFAMILY Peptidyl-tRNA hydrolase II 122 237 IPR023476 -
Lja1g3696 237 TIGRFAM arch_pth2: peptidyl-tRNA hydrolase 124 237 IPR002833 GO:0004045
Lja1g3696 237 Pfam Peptidyl-tRNA hydrolase PTH2 123 237 IPR002833 GO:0004045
Lja1g3696 237 PANTHER PEPTIDYL-TRNA HYDROLASE 2, MITOCHONDRIAL 50 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3696 Lja-Chr1 46261426 46264782 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3696 K04794 - gmx:100527852 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3696 1 46261426 46264782 Lja1g3696 1 46261426 46264782 ECH