Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3690 ATGGCTGCCGTCGAGACGACGGAGATGGAGCCACTAACCTCCGGCGCCAGCAACCGCATCATTCCGATTCTGAAATCTCTCCGAGCCTCCCTCATCTTCGTCTACACCTACTTCCTCTCCTTCCTCTTGTTCCTCCTCCCTCGCCTTTCCTTTCCCCGGAAGCATTTGAAGCGGCGGTGGTTGATTCGTGAAGAGGAGGACACGTTCCGGAGAAGGGCGTTGGCTCAGGACGTTGGGATGGGAAGCGATGATGATGGTTGCTGCCGTTGGACCACTTGTATCTTCTATGGGGTTAGAAACAACGCTCTGTTCTGCCGATCGTGGTTTCCGGTGTCTGGTAGTCTCAAGGGCATTATGATCATCATTCATGGGCTTAATGAACACAGTGGAAGATATGCGGACTTTGCAAGGCAATTAACATCATGCAACTTTGGTGTTTTTGCAATGGACTGGATAGGTCATGGAGGTAGTGATGGACTGCACGGTTATGTTCCTTCCCTTGATCATGTAGTTGCAGACACAGGGGCTTTATTGGAGAAGATTAAATCTGAGAATCCTGGGGTACCGTGCTTTCTCTTTGGTCACTCCACTGGTGGGGCTGTGGTTTTGAAAGCGGCTTCCTACCCTCATATTGAAGTGATGGTGGAAGGAATTATATTAACTTCACCAGCTTTGCGCGTGAAGCCAGCTCATCCAATTGTTGGTGCTGTTGCTCCATTTTTTTCGCTGGTAGCTCCTAAGTTCCAATTCAAAGGAGCAAACAAACGGGGCATTCCAGTTTCGAGGGATCCTGCAGCATTGCTGGCGAAGTATTCTGATCCTCTGGTCTACACAGGGCCTATAAGGGTCCGAACTGGCCATGAAATACTTCGGATATCATCGTACTTAATGCGAAACTTCAAGTCTGTGACGGTGCCGTTCTTTGTTCTGCATGGAACTGCTGATAAGGTAACTGATCCGCTGGCCTCGCAGGATCTGTACAACAAGGCAGCTTCAGAGTTCAAAGACATAAAGCTCTATGATGGCTTCTTGCACGATCTTCTGTTTGAGCCTGAGCGCGAAGAGATTGCTTTGGACATTATCAACTGGATGGAGAAGAGATTATTTACTATTTGA 1116 0.4866 MAAVETTEMEPLTSGASNRIIPILKSLRASLIFVYTYFLSFLLFLLPRLSFPRKHLKRRWLIREEEDTFRRRALAQDVGMGSDDDGCCRWTTCIFYGVRNNALFCRSWFPVSGSLKGIMIIIHGLNEHSGRYADFARQLTSCNFGVFAMDWIGHGGSDGLHGYVPSLDHVVADTGALLEKIKSENPGVPCFLFGHSTGGAVVLKAASYPHIEVMVEGIILTSPALRVKPAHPIVGAVAPFFSLVAPKFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLMRNFKSVTVPFFVLHGTADKVTDPLASQDLYNKAASEFKDIKLYDGFLHDLLFEPEREEIALDIINWMEKRLFTI* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3690 371 PANTHER PHOSPHOLIPASE-RELATED 54 368 - -
Lja1g3690 371 Gene3D alpha/beta hydrolase 92 368 IPR029058 -
Lja1g3690 371 Pfam Serine aminopeptidase, S33 115 352 IPR022742 -
Lja1g3690 371 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 54 368 - -
Lja1g3690 371 SUPERFAMILY alpha/beta-Hydrolases 100 368 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3690 Lja-Chr1 46184991 46189176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3690 3 288 Acyl Lipid Metabolism Gene Families AT5G11650 68.212 9.31e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3690 - K01054 gmx:100816265 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3690 1 46184991 46189176 Lja1g3690 1 46184991 46189176 ECH