Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3685 ATGGCAGAGGAATCTAAGCTGAAATGGGAAGGCAAAGCCATTGTTGAGCTTCCAGGCACAGGCGCAGAAGCAGTGTGGCCCTTTTTAGAGGATTTCTGCAACCTGCACAAGTGCTTCCCCATTGATACTAGTTACCAAGTTGAGGGGATTCAAGGCCAACCTGGTCTCATCCGCTACTGTGCTTCCACCATAAAAGGGGATGATGCTGCTGATGAGACAACCATCAAGTGGGCTAAAGAGAAGCTGCTGACAATTGATCCCGTTCAACGTTGTTTGTCCTATGAAACTGTCGACAACAACATCGGATTTAAGTCTTATGTGGCCACACTGAAAGTAGTCCCGGTCAACGGGGATGATGCTAAACTAGCAGGGTGCAAGATTGAATGGGGGTTTGTCAGTGATCCAATGGAAGGGTGGAGTTTTCAAGATTTGAAGTCTTACATTGAGTCCTCTCTCCAGTTCATGGCCAACAAGATTGATCAGCTTGAATGCTCTGAGAATTAA 504 0.4663 MAEESKLKWEGKAIVELPGTGAEAVWPFLEDFCNLHKCFPIDTSYQVEGIQGQPGLIRYCASTIKGDDAADETTIKWAKEKLLTIDPVQRCLSYETVDNNIGFKSYVATLKVVPVNGDDAKLAGCKIEWGFVSDPMEGWSFQDLKSYIESSLQFMANKIDQLECSEN* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3685 167 PANTHER - 5 162 - -
Lja1g3685 167 SUPERFAMILY Bet v1-like 21 161 - -
Lja1g3685 167 Gene3D - 2 167 IPR023393 -
Lja1g3685 167 CDD PYR_PYL_RCAR_like 9 159 - -
Lja1g3685 167 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORTER 5 162 - -
Lja1g3685 167 Pfam Polyketide cyclase / dehydrase and lipid transport 22 156 IPR019587 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3685 Lja-Chr1 46067157 46067660 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3685 - - gmx:100798368 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3685 1 46067157 46067660 Lja1g3685 1 46067157 46067660 ECH