Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3681 ATGGACCGTTTGCGTCCTCGGAACAGAGCCACCTTTTCTGGATTCACAAACGCCGAGATTGAGAAAATGGACAAGTTATCAGGTGAATCACAGGGACGATCGTTCGACCGCGAATTTTACCAGAAGCTCACTGCATCTTTCAACCGTTCGTCTGGTCGTGCTGGGAAACCTACTGTAAAATGGACCGAGGTACAAAGTTGGTTTCAGGCTAGAATTCAAGACTTACCAGAAGTCCCTGAAAATAATTTGGAGTCTTCTCAAGGCAAATGTAAGGAAGGAGAAACTATCCGAGACCCATCACAGTTGGAATTTGAAGCGAGATCAACAAAAGATGGAGCATGGTATGATGTTGAGGCATTTTTAGCTCACCGATTTGTTGGCACGGGAGAAGCTGAAGTCCGTGTCAGATTTGTGGGATTTGGAGCTTCGGAAGATGAGTGGGTCAACATAAAAGATTCAGTCCGAGAGCGCTCTGTTCCTTTTGAAAGCACGGACTGTTCCTACCTGAATGTTGGAGATCCTGTCCTGTGCTTCCAGGAGAGGAGAGATCAAGCAATTTACTATGATGCTCGTATATTAGAGATTCAAAGGAGAATGCATGATATTAGAGGCTGCAGGTGTCTCATCTTAGTTCGGTATGATCATGACAACACTGAGGAAAAAGTTCGCTTGAGGAGACTTTGTCGCAGACCATAA 696 0.4511 MDRLRPRNRATFSGFTNAEIEKMDKLSGESQGRSFDREFYQKLTASFNRSSGRAGKPTVKWTEVQSWFQARIQDLPEVPENNLESSQGKCKEGETIRDPSQLEFEARSTKDGAWYDVEAFLAHRFVGTGEAEVRVRFVGFGASEDEWVNIKDSVRERSVPFESTDCSYLNVGDPVLCFQERRDQAIYYDARILEIQRRMHDIRGCRCLILVRYDHDNTEEKVRLRRLCRRP* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3681 231 Gene3D - 161 231 - -
Lja1g3681 231 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 9 231 IPR039276 -
Lja1g3681 231 SUPERFAMILY Chromo domain-like 111 153 IPR016197 -
Lja1g3681 231 Pfam SAWADEE domain 101 228 IPR032001 GO:0003682
Lja1g3681 231 Gene3D - 99 160 - -
Lja1g3681 231 PANTHER OS09G0346900 PROTEIN 9 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3681 Lja-Chr1 45989665 45993989 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3681 - - gmx:100801021 379.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3681 1 45989665 45993989 Lja1g3681 1 45989665 45993989 ECH