Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3676 ATGGACACTGAAGAAGAAAAGGGTCATGCTTCTATGAGACTCTCAAGTACAGAAGTGGATGATGATGGGAGAACCAAGAGAACCGGGAACGTGGTGACAGCTACAACACACATAATAACAGTGGTGGTTGGGGCAGGAGTGTTGGCTCTGGCATGGGCAATGGCTCAGCTAGGATGGATAGCTGGAATTGCAGTGATGGTTATGTTTGCATGCATTTCCATTTACACTTACAATCTCATTGCAGATTGCTACAGATACCCTGACCCTGTCACTGGCAAGAGGAACTACACTTATATGCAGGCCGTTCATGCATACCTTGGTGGGAAAATGTATGTGTTTTGCGGATTGATCCAATATGGGAAGCTGGCTGGGGTTACAATAGGCTATACAATAACTACTTCCACAAGCTTGGTAGCTATAAGGAAAGCCATTTGCTTCCACAAAAAAGGCCATCAAGCTTATTGCAAGTTTTCAAATAATCCTTATATGATTGCTTTTGGGATCTTGCAAATTTTTCTGTCCCAAATCCCGAATTTCCATAAGTTAACATTTATTTCAACCATTGCTGCTCTTTCCTCTTTTGGTTATGCATTTATTGGAAGTGGACTTTCTCTAGGAGTCCTGTTCTCAGGGAAAGGAGAAACAACCAGATTATTTGGAATTAAAGTAGGGCCAGAATTATCTGGAGAAGAAAAAGTTTGGAAGGTTTTCAGTGCTTTGGGAAACATTGCACTTGCTTGCTCTTTTGCTACTGTTGTCTATGATATAATGGACACCTTAAAGTCAGATCCACCAGAAAGTATACAGATGAAAAAGGCCAATGTGTTGGGGATCACTGCAATGACAATACTTTTTCTTCTATGTGGTAGCCTTGGCTATGCTGCTTTTGGTGATCAAACACCAGGGAACATCCTCACTGGCTTTGGATTTTACGAGCCTCATTGGTTGGTTGCATTGGGGAATGTATGCATTATAGCTCACATGGTGGGAGCATATCAGGTGCTTGCTCAACCATTATTTCGTATAGTTGAGATGGGTGCTAACTTGGCATGGCCACAATCTACCTTCTTAAACAAGGAATACCCAACAAAAATAGGCTTCAACCTCAACTTGTTCAAGTTAATATGGAGGACAATATATGTGATAATAGCCACAATCATTGCCATGGCAATGCCATTTTTCAATGAGTTTCTTGCTCTCCTTGGAGCAATTGGGTTTTGGCCACTCATTGTCTTCTTCCCTATTCAAATGCACATTTCACAAAAACAAATAAGAACCCTATCATCAAAGTGGTGTGTGCTCCAAATGTTGAGTTTAGTGTGCTTCCTTGTTTCAGTAGCTGCGGGAGTTAGTTCTGTTCGTGGAATTATGGAGAATATCAACAAATACAAACTCTTCATGTATAAACAGTAG 1413 0.4105 MDTEEEKGHASMRLSSTEVDDDGRTKRTGNVVTATTHIITVVVGAGVLALAWAMAQLGWIAGIAVMVMFACISIYTYNLIADCYRYPDPVTGKRNYTYMQAVHAYLGGKMYVFCGLIQYGKLAGVTIGYTITTSTSLVAIRKAICFHKKGHQAYCKFSNNPYMIAFGILQIFLSQIPNFHKLTFISTIAALSSFGYAFIGSGLSLGVLFSGKGETTRLFGIKVGPELSGEEKVWKVFSALGNIALACSFATVVYDIMDTLKSDPPESIQMKKANVLGITAMTILFLLCGSLGYAAFGDQTPGNILTGFGFYEPHWLVALGNVCIIAHMVGAYQVLAQPLFRIVEMGANLAWPQSTFLNKEYPTKIGFNLNLFKLIWRTIYVIIATIIAMAMPFFNEFLALLGAIGFWPLIVFFPIQMHISQKQIRTLSSKWCVLQMLSLVCFLVSVAAGVSSVRGIMENINKYKLFMYKQ* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3676 470 Pfam Transmembrane amino acid transporter protein 28 456 IPR013057 -
Lja1g3676 470 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 16 465 - -
Lja1g3676 470 PANTHER OS05G0424000 PROTEIN-RELATED 16 465 - -
Lja1g3676 470 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3676 Lja-Chr1 45878302 45883349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3676 6 466 Organic Solute Cotransporters AT1G10010 54.194 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3676 K24917 - gmx:100802090 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3676 1 45878302 45883349 Lja1g3676 1 45878302 45883349 ECH