Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3672 ATGGAGTCCACCGAATCTGAATCGCAGATGATGAAGATCGTCCATGGCGACGCTGGTTACATACTCGAAGACGTTCCTCACTTCACCGACTACATTCCAAATCTTCCAACATATCCAAATCCACTGCGATCCAATCCAGCTTACTCAGTTGTCAAGCAGTATTTTGTGCACATGGACGACACCGTTCCTCAGAAGGTTGTTGTTCACAAGGATAGCCCAAGAGGTGTACATTTTAGACGTGCAGGACCTCGGCAAAAGGTATATTTTAAATCGGATGATGTGCATGCGTGCATTGTTACATGTGGTGGTCTCTGCCCTGGCCTCAACACTGTCATAAGGGAAATCGTTTGTGGTCTTTCTTACATGTATGGTGTCAACAAAGTCCTTGGCATAGATGGTGGTTATAGAGGTTTTTATTCCAAGAACACCATTACTTTAACACCTAAAGTGGTCAATGATATCCATAAGCGTGGAGGAACGATTCTTGGGTCTTCGCGAGGGGGACATGACACTGGCAAGATAGTTGATAGCATCCAGGATCGTGGAATTAATCAGGTTTATATTATTGGAGGAGATGGAACACAGAGAGGAGCGGCTGTGATTTATGAGGAAGTGAGACGGCGGGGTCTGAAAGTCGTAATTGCTGGAATTCCTAAGACCATAGATAATGACATCCCGGTTATTGACAGGTCCTTTGGCTTTGATACTGCAGTTGAGGAGGCTCAACGTGCCATTAATGCAGCACATGTTGAAGCTGAAAGTGTTGAGAATGGCATTGGCGTTGTAAAGCTAATGGGTCGTTATAGTGGTTTTATTGCAATGTATGCTACTCTGGCCAGCAGAGATGTGGACTGTTGCTTGATTCCAGAGTCACCCTTCCACCTTGAAGGAAAGGGCGGGCTTTTTGAATTCATTGAGAAAAGATTGAGAGAAAATGGGCATATGGTTATAGTCGTAGCTGAGGGAGCAGGACAAGATCTTCTTAATGAAAGCATGCAAGCCACGGAGGAGAAGGATGCTTCTGGAAACAAGCTACTTCAAGATGTTGGTTTATGGATATCTCATCAGATCAAGGGTTATTTCTCAAGGGAAAATAAGATGCCCATGAATCTTAAATATATAGATCCAACTTACATGATTCGGGCTATTCCAAGCAATGCATCAGACAATGTCTACTGCACACTTCTTGCTCAGAGTGCAGTTCATGGTGCAATGGCAGGGTATACTGGATTCACAAGTGGGCTGGTCAATGGCAGACAGACTTATATTCCGTTCAACAGAATCATTGAGAGGATGAACCAGGTTGTGATTACTGACAGGATGTGGGCAAGACTCCTTTCTTCAACCAACCAGCCAAGTTTTTTGAAATGCAAAGATGTCAATGAAGTCAATAAAGAAGAACAACCTCCAACTCAGTTGTTAGAAGGGGATAATTGCAATGGTATTGACGGAGCCAAGAAAGTAGAACAACCTCCCTCTCAGTTGTTAAAAGGGGACAATTTAAAAGAAGAGCAGGAATCAGGAAACCAAGTTGATAATTGTAACAGGACAGAAACATAG 1560 0.4346 MESTESESQMMKIVHGDAGYILEDVPHFTDYIPNLPTYPNPLRSNPAYSVVKQYFVHMDDTVPQKVVVHKDSPRGVHFRRAGPRQKVYFKSDDVHACIVTCGGLCPGLNTVIREIVCGLSYMYGVNKVLGIDGGYRGFYSKNTITLTPKVVNDIHKRGGTILGSSRGGHDTGKIVDSIQDRGINQVYIIGGDGTQRGAAVIYEEVRRRGLKVVIAGIPKTIDNDIPVIDRSFGFDTAVEEAQRAINAAHVEAESVENGIGVVKLMGRYSGFIAMYATLASRDVDCCLIPESPFHLEGKGGLFEFIEKRLRENGHMVIVVAEGAGQDLLNESMQATEEKDASGNKLLQDVGLWISHQIKGYFSRENKMPMNLKYIDPTYMIRAIPSNASDNVYCTLLAQSAVHGAMAGYTGFTSGLVNGRQTYIPFNRIIERMNQVVITDRMWARLLSSTNQPSFLKCKDVNEVNKEEQPPTQLLEGDNCNGIDGAKKVEQPPSQLLKGDNLKEEQESGNQVDNCNRTET* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3672 519 Coils Coil 238 258 - -
Lja1g3672 519 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 25 455 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lja1g3672 519 MobiDBLite consensus disorder prediction 466 519 - -
Lja1g3672 519 PIRSF ATP_PFK_TP0108 3 459 IPR012004 GO:0003872|GO:0005524|GO:0006096
Lja1g3672 519 Pfam Phosphofructokinase 97 402 IPR000023 GO:0003872|GO:0006096
Lja1g3672 519 Gene3D - 91 280 - -
Lja1g3672 519 PRINTS ATP-dependent phosphofructokinase family signature 254 270 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lja1g3672 519 PRINTS ATP-dependent phosphofructokinase family signature 182 198 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lja1g3672 519 PRINTS ATP-dependent phosphofructokinase family signature 215 232 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lja1g3672 519 PRINTS ATP-dependent phosphofructokinase family signature 98 117 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lja1g3672 519 PRINTS ATP-dependent phosphofructokinase family signature 311 323 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lja1g3672 519 PRINTS ATP-dependent phosphofructokinase family signature 233 251 IPR022953 GO:0003872|GO:0006002|GO:0006096
Lja1g3672 519 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 6 480 - -
Lja1g3672 519 SUPERFAMILY Phosphofructokinase 28 464 IPR035966 GO:0003872|GO:0006096
Lja1g3672 519 PANTHER - 6 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3672 Lja-Chr1 45837339 45843336 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3672 K00850 - gmx:100818755 919.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3672 1 45837339 45843336 Lja1g3672 1 45837339 45843336 ECH