LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g3670	ATGTTCTCTATTGCAGCTATCAACGATACCGATACTAAAACCCAGTGGGAACCGCTAGCTCCCACCAAAGAAGCCCAGGAATTTCATCTTTCTCAAACTTATCATGATGGACTTCTCAAGCTACAAGCCAAAGATTATGAGAAGGCTCGCGAGCTCTTGGAATCTGTCCTTAAAGATCCTCTTGTTGCTAATGCTCAGGTGGAGAGCAGTGCAAGTGACGGTCATCTGTTGCAACTCAGATTTTTGGCTTTGAAAAACCTCGCTACTGTTTTCCTTCAGCAAGGTTCTACGCATTATGAGAATGCACTGCACTGTTATCTTCAAGCCGTGGAGATTGACTCTAAGGATTCTGTTGTCTGGAACCAGCTGGGAACATTGTCGTGTTCAATGGGCGTACTAAGTATTTCACGTTGGGCATTTGAGCAAGGCCTCTTGTGTAGCCCTAATAACTGGAATTGCATGGAAAAGCTTTTGGAAGTTCTTATTGCAATTGGTGATGAGGTTGCTTGCCTTTCTGTTGCTGAGTTGATTTTAAGACACTGGCCATCACATTCTCGTGCTTTGCACGTTAAAAATACCATTGAAGAATCAGAACCATTGTCATTTGCTCCCAAAGGGATAGACAAATTGGAACCTAAACATGTGCGGCTCAAATTCCCTGACAAGAGAAAAGCTACTAAGGAAAATCTAGACGAGGACGTTCCGTACAAAAAGCTGAAGCAGAATAAAGATCTGCACCTGAAAGAAGCTTCCTGGGTGGCCCTTGCTGATGCACTATTGGAAACATTATTGCCGTTGAATCTGCAAAGTTCTGACATGGATTCTGAAAAAGCAAGCTATTCTCCGGACATTAGGATAAGCATAAAGCTAACTTGCGGTTCAGAAGCTGTTATGAACACTGTGGAAGTGAAAGGGTCTAATAGTGAAAGTAGTGGTTTTATTGATGGTAATATAGATCGATCAAGTATTCCTAAAGCGAAAGAAGCAAACATTCAAGAAGAACAACCGCATGAAAGACGAAGTTCTCGGCTTGAAAGGCTCCGGAGTCGTAAACCGGGGAATGAAGAATCTGATTCTTGTGGCAAGGACTGTGCCAAGGTAGTCAGTCAATATCTAGAATCTTTTATTGCTGGTGGATTGAGCGGTCGAGATACTATTAATGGTGATACCACGACACTATCTTGTTTAGGAAATTCTGAATATAATAATGTTTGTGCATTTTTAAGAGAAACTTCAAACAATTATGGTTCCTACCATATGGGGCACTTGCTTCTAGAAGAGGTTGCAAGACAAGGCCTGAGATATCAGGATGCTTTTGTCAAATTTCTGGAGTTGGAAAAGTTGACTAGGCATTGGGGAAAGGAGAGAACGGCTGAATGTAATATTTTTCTTGCTGAGCTGTATTATGACTTTGGGTTATGCTCCACCAATGGTTCTAAACAATCAGAATTTTTATCAGAGGCATCTTATCATCTCTGTAAGATCATAGAGTCTGTAGCTCTTGAGTATCCTTTTCACTTGACCCATGCCCAGAATGAAAGTTGTTTTCTGATTGATGATTTCCAAATGGCTAGTGGAACATCAATAGATACCTCCACTGAGAGCAGTTCACATTTAGACAGCTCACTTCTGATGAAAAACAGTTCATTCTGGGCTCGATATTTCTGGCTAAGTGGGAGATTGTCTATTTTTGATGGCAACAGGGAAAAAGCTTGTGAAGAACTTTGTACTGCTTTGTCACTTTTGGCAAAGAGGGATAATATGGAACATTCTCCAGGTCCAGTCTGCCGCCCACATTGCAAGGGTGTAAAAGAGCTAAACATTGACAGAGTTCGTTACGAAATTAACATATTAAAGGTCAATTTCTTGATGGAAAAGTCTGTCATTAAGATGATGGAACAAGAAAAGTTTCTTGAGTGTGTATCCCTGCTTTCTCCACTTATGTTTTCCACACAGGATGTCTACGTCGATTCATTTTCTTTATTCTTGGCAGATAAAAAAGATGAAAAAATAACTTCCGTTGAACTCATGGCTCTAGATATTCTAACTGAAGCATGTCAGAAGTCAAGGTCAATGGATGTAGAGATGTACTTCAATTGCCATTATAGGAAGCTGAAAATACTTATGGCAATGATGGGGTTGAATAAATGTGTTACGTCATTTAATTCTTCTGATCAAACTCTTGGTTTAAGTGCATCTTCCAATTCTGGTATTGATTCAAATGAAAGTTCTAACAAGCACTTTAGTCACTTGGTTGTTGAAGAAGTGAAGGCACTCTCTGACTGTATCTCAAAAGTAAAGGAAGTTATTGATCATCAGGGAGATTCTGATGCCCTTATTGTTTCAACAAGCAGCATTTGCCATCTGCAATCTCTACTGTTGTTAATCATGAGCTACTTCGCTAATGTACTTGTCTGCAACAAAGCCTCTGCCCAAGTAATTTCTGATCCAGTGAAAAGCAGCTGTTTTGTTGATGCAGCCATTATTTTCTGTAAACTCCAGCATCTTAGCCCAAATACACCTATCAGAACTCAAGTTGATTTAATAGTTGCAACACATGACTTGCTTGCTGAGTATGGGCTTTGCTGTGTGGGTGAAGGGGGCAAAGGTGAAGAAGGAACATTCCTTAGATTTGCTATAAAGCATCTCTTGGCCTTGGATATGAAGCTCAAATCCAGGTTTAACCTTCTAGATAAAAAATCAATGCACTGCGAAGAAGTGCCCGAAGACGCTATTGTTAATTTATCTGTTGAAGATTTAAAATCAAATACATCAGATATCTGGAACAAAGTTGATGACGTCAATTCTGTGAAAAAGGATGTATCTGAAGGAATAATGTCTGAAGGCATTTCATCATGCAAAGTTCATGATAAAGACAGTAAGGAAGTAGAGTTTGGAAATCATGGAGGTTCTCAGACTGACAGTGAGTTCGTGAAGGGTGAAAATTTGTGCAATGACTCGATTGAATGTGAAAACGAACTTTCAGAAGATGAAAGGGATGAACTTGAGTCTAAAATTGACAGTGCCTTAGATCAGTGCTTTTTCTGTTTATATGGATTAAATCTAAGATCGGATTCATCATATGAAGATGATATGGTGACACACAAAAATACAAGCCGAGGAGACTATCAAACCAAGGAACAGTGTGCTGATGTTTTCAAGTATGTTCTTCCCTATGCAAAGGCATCTTCTAGGACTGGACTGGCCAAACTTCGTAGAGTTTTAAGAGCTATACGGAAGCACTTTCTGCAGCCACCAGACGATCTGTTGGAAGGAAATCCTATAGACAAGTTTCTGGATGATCCTAATCTATCTGAAGAAAATCTCTCAGAGGAGGCTGGGGCTGATGGTTTTCTTGAAACTCTAACTAAGATCATGTTCCCTGATGCGGGAGGCCTTGCACAATATAAAACAACACTATTGAAGAGGTCTGAGCCATATTTGGAGGTTTACTGTAACTTGTATTATTTCTTAGCTCTGTCCGAGGAAATGAGCGCAACAGATAAATGGCCTGGATTTGTGCTGACCAAGGAAGGAGAAGAATTTGTTGAACAAAATGCAAAGCTCTTCAAATTCGACCTCGTATACAATCCGTTGCGCTTTGAAAGCTGGCAACGGCTTGGAAATATTTATGATGAGGAAGTAGATTTATTGCTAAATGATGGTAGCAAGCACATCAATGTGGTAGGATGGAGGAAGAATCCTACTTTATCTGAGAGAGTGGAAACAAGCCGGAGGAGGAGTAGACGGTGCCTACTAATGAGTTTAGCTTTGGCAAAGACATCTGCTCAACAGTGTGAGATACATGAGCTTTTGGCATTGGTTTATTACGACAGCCTTCAAAGTGTAGTCCCCTTTTATGATCAGAGATCTGTTTTGCCCTCAAAGGATGCAACATGGGTGATGTTTTGTGAGAACTCAATGAAACATTTTAAGAAAGCCTTCTCATTGAAGCAAGATTGGTTGCATGCATTTTACTTGGGTAAACTCAGCGAGAAGCTTGGATATTCACTTGAAATTGCATTATCGTACTACAACAATGCTATTGCTTTGAACACATCAGCTGTTGATCCTGTGTATAGGATGCATGCCTCACGCTTGAAGCTATTATTTAAGTCAGGAAGACAGAATTTGGAGATTTTGAAGGTTCTTTCATTAAACTCCTTTAATCTATCTGTAAAAGAAGCCGTTGCGAGTATCCTTGGTGATATGGATAGCTCGTTCATAGATACTAAGGAGGAATGTGTTCATGCCAATTCTGTGGAAGCGAAGCATGAAGGGTTGCTGAAATTGGATAAAGTATGGTCCATGCTTTACAGCGATTGCCTTTCTGCGCTTGAAACTTGTGTAGAGGGGGATCTCAAACATTTTCATAAGGCCAGATACATGCTGGCTCAAGGGCTGTATAAAAGGGGTGAAAGTGGTGATATAGAAAGGGCAAAAGATCAACTATCATTCTGCTTCAAATCTTCACGCTCATCATTTACAATAAATATGTGGGAAATTGATAGCACAGTAAAAAAGGGAAGGCGCAAGACACCTGGTTCTGCTGGGAACAAAAAAGCCCTTGAGGTTAACTTACCTGAAAGTTCTCGAAAGTTCATTACATGCATTCGAAAGTATGTGCTGTTTTATCTCAAACTATTGGAGGAGACGGGAGATAGAGGTATTCTTGAACGTGCATATGTTTCTCTTCGGGGAGATAAGCGGTTTTCATTATGTATGGAAGATCTTGTTCCAGTGGCCATTGGAAGATATTTAAGGGCACTGATTTCAACTTTGTGCCATTCTGAGACTACTGCCTCTGGGTCAGTGAGCAATTCTGATAATGTGCTGGAGAGGATGTTTGCTTTGTTCATCGAGCAAGGGAGCTTATGGCCCGAAATATACAGCTTGCCTGAAATTGAAGGCCCAGAAACATCAGAGACTATCATATATGGATATCTTCATGAACATATTGTCTTGTTGGAAAAGAATGGAAAAGTGGAAACCCTGGAAGCAATAAATGAGAAAATTCGGAGACGTTTTAAGAACCCAAAGTTGTCAAATAGTAGTTGTGCAAAAGTTTGCAGGCACGCTTCTGTTGCTTGGTGCCGATCTCTTATATATAATCTGGCACAAATCACTCCTTTATCATGTGGATTTTCAAATGGGATTCAGGCCCTTAATTTGACTGATGGTGGGACGGATAGTAGCCAATTGCTCTGTATTGATTTGCAGCCACGTGAATTATGGGGTACAGCTTTTGAAGATCCAACTCATTTAGAAAAGATTGAAACAAAATGGAGTGCCATTTTATCTAAAGTAAAAAATATAATGATCAAGAAAGTTTCTGATGAAAATTTGGAAACTGCTAGCACTTTGCTCAAAGCTTGCTATAATTTTTACCGGGAGAGTTCTTCTGTGGTGCTGGCGTCTGGCCTCAACTTTTATTTGATTCCATCCCAATTGGTAACAGAAACACCATTCAACCCAAGTATGGTTGGGATTGAAGCACTTGATCTGAGCATTCCAAGGAAGCTTCTCTTGTGGTCCTATGCATTATTGCATGGACGTTATGCAAATATCTCGGTTGTTGTAAGGCATTGTGAAGAAATTTCAAAGTCGAAGATTAAAAGAGGAAGTGGAACCTCACCTGCGTTTTCAAGCACACCTGCTTCTACCTCTACTCATCCAGGTAGTGGCAAAAGTGGACCAAACTCTGCCGGAGGAACTGATGTTGATTGCACTCCATTTTCTAGCAGTAATAATACCACTAACGTTGTGAATTCCTCCAATGAGATTCAGAAGAATCTCTTTGGTTCTCCCCAATTGCATCCATGTACCACCAATGATGATGCAGAAAGAAACAGTTTGAAGGCACATGAAGTAGATAATGTCCAAGATTGA	5889	0.4021	MFSIAAINDTDTKTQWEPLAPTKEAQEFHLSQTYHDGLLKLQAKDYEKARELLESVLKDPLVANAQVESSASDGHLLQLRFLALKNLATVFLQQGSTHYENALHCYLQAVEIDSKDSVVWNQLGTLSCSMGVLSISRWAFEQGLLCSPNNWNCMEKLLEVLIAIGDEVACLSVAELILRHWPSHSRALHVKNTIEESEPLSFAPKGIDKLEPKHVRLKFPDKRKATKENLDEDVPYKKLKQNKDLHLKEASWVALADALLETLLPLNLQSSDMDSEKASYSPDIRISIKLTCGSEAVMNTVEVKGSNSESSGFIDGNIDRSSIPKAKEANIQEEQPHERRSSRLERLRSRKPGNEESDSCGKDCAKVVSQYLESFIAGGLSGRDTINGDTTTLSCLGNSEYNNVCAFLRETSNNYGSYHMGHLLLEEVARQGLRYQDAFVKFLELEKLTRHWGKERTAECNIFLAELYYDFGLCSTNGSKQSEFLSEASYHLCKIIESVALEYPFHLTHAQNESCFLIDDFQMASGTSIDTSTESSSHLDSSLLMKNSSFWARYFWLSGRLSIFDGNREKACEELCTALSLLAKRDNMEHSPGPVCRPHCKGVKELNIDRVRYEINILKVNFLMEKSVIKMMEQEKFLECVSLLSPLMFSTQDVYVDSFSLFLADKKDEKITSVELMALDILTEACQKSRSMDVEMYFNCHYRKLKILMAMMGLNKCVTSFNSSDQTLGLSASSNSGIDSNESSNKHFSHLVVEEVKALSDCISKVKEVIDHQGDSDALIVSTSSICHLQSLLLLIMSYFANVLVCNKASAQVISDPVKSSCFVDAAIIFCKLQHLSPNTPIRTQVDLIVATHDLLAEYGLCCVGEGGKGEEGTFLRFAIKHLLALDMKLKSRFNLLDKKSMHCEEVPEDAIVNLSVEDLKSNTSDIWNKVDDVNSVKKDVSEGIMSEGISSCKVHDKDSKEVEFGNHGGSQTDSEFVKGENLCNDSIECENELSEDERDELESKIDSALDQCFFCLYGLNLRSDSSYEDDMVTHKNTSRGDYQTKEQCADVFKYVLPYAKASSRTGLAKLRRVLRAIRKHFLQPPDDLLEGNPIDKFLDDPNLSEENLSEEAGADGFLETLTKIMFPDAGGLAQYKTTLLKRSEPYLEVYCNLYYFLALSEEMSATDKWPGFVLTKEGEEFVEQNAKLFKFDLVYNPLRFESWQRLGNIYDEEVDLLLNDGSKHINVVGWRKNPTLSERVETSRRRSRRCLLMSLALAKTSAQQCEIHELLALVYYDSLQSVVPFYDQRSVLPSKDATWVMFCENSMKHFKKAFSLKQDWLHAFYLGKLSEKLGYSLEIALSYYNNAIALNTSAVDPVYRMHASRLKLLFKSGRQNLEILKVLSLNSFNLSVKEAVASILGDMDSSFIDTKEECVHANSVEAKHEGLLKLDKVWSMLYSDCLSALETCVEGDLKHFHKARYMLAQGLYKRGESGDIERAKDQLSFCFKSSRSSFTINMWEIDSTVKKGRRKTPGSAGNKKALEVNLPESSRKFITCIRKYVLFYLKLLEETGDRGILERAYVSLRGDKRFSLCMEDLVPVAIGRYLRALISTLCHSETTASGSVSNSDNVLERMFALFIEQGSLWPEIYSLPEIEGPETSETIIYGYLHEHIVLLEKNGKVETLEAINEKIRRRFKNPKLSNSSCAKVCRHASVAWCRSLIYNLAQITPLSCGFSNGIQALNLTDGGTDSSQLLCIDLQPRELWGTAFEDPTHLEKIETKWSAILSKVKNIMIKKVSDENLETASTLLKACYNFYRESSSVVLASGLNFYLIPSQLVTETPFNPSMVGIEALDLSIPRKLLLWSYALLHGRYANISVVVRHCEEISKSKIKRGSGTSPAFSSTPASTSTHPGSGKSGPNSAGGTDVDCTPFSSSNNTTNVVNSSNEIQKNLFGSPQLHPCTTNDDAERNSLKAHEVDNVQD*	1963

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g3670	1962	PANTHER	CALCINEURIN-BINDING PROTEIN CABIN 1-RELATED	1	1941	IPR033053	-
	Lja1g3670	1962	MobiDBLite	consensus disorder prediction	326	361	-	-
	Lja1g3670	1962	Coils	Coil	985	1012	-	-
	Lja1g3670	1962	MobiDBLite	consensus disorder prediction	1946	1962	-	-
	Lja1g3670	1962	Gene3D	Tetratricopeptide repeat domain	25	199	IPR011990	GO:0005515
	Lja1g3670	1962	SUPERFAMILY	TPR-like	34	169	IPR011990	GO:0005515
	Lja1g3670	1962	MobiDBLite	consensus disorder prediction	1871	1962	-	-
	Lja1g3670	1962	MobiDBLite	consensus disorder prediction	305	361	-	-
	Lja1g3670	1962	MobiDBLite	consensus disorder prediction	1872	1945	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g3670	K17613		-	gmx:100783547	3063.09

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja1g3670	1	45817815	45831851	Lja1g3670	1	45817815	45831851	ECH