Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3667 ATGGGCAGAACTCAAATGTGTCTCTGCTGCCACCAATATAGACAAATGATCACATGGCTCATTCTCTTTGCTTCAACTTCTCTCTTCACCCACTTTGTTTTCATGGCTGAAGGAAGAGCAATTTCCAACCACATTGAAGTTTCCCAGAATCATATAGGGTCAAGTCCACCAAATTGTGAAAGAAGATGCAGAACATGTGGGCATTGTGAGGCAGTTCAAGTCCCTGTTGCACCTCAAATTCAAAACCATAGAAGCCATTTTCCTGCAGCAAGAGAAGCTGCAAGTCTTACTTACTCCAGAGGAGATTCACTTTCCAACTACAAACCCATTAGTTGGAAGTGCAAGTGTGGGGACTACATTTTCAACCCATGA 372 0.4301 MGRTQMCLCCHQYRQMITWLILFASTSLFTHFVFMAEGRAISNHIEVSQNHIGSSPPNCERRCRTCGHCEAVQVPVAPQIQNHRSHFPAAREAASLTYSRGDSLSNYKPISWKCKCGDYIFNP* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3667 123 Pfam Epidermal patterning factor proteins 52 123 - -
Lja1g3667 123 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 2 1 123 - -
Lja1g3667 123 PANTHER EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4 1 123 IPR039455 GO:0010374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3667 Lja-Chr1 45765913 45766659 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3667 - - lja:Lj1g3v2095690.1 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3667 1 45765913 45766659 Lja1g3667 1 45765913 45766659 ECH