Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3664 ATGGATCCTTGCCCTTTCGTGTGCCTCACTGTAGGCAACCTCGCTCTCAAAATCCCCGTCGCGTCCAAGCCAGCACGCTCCGTCGTCCACCCTTCCTCCTCCCCCTGCTTCTGCAAAATCAAGCTCAAGCACTTCCCTCCACAATCCGCTCTCGTCCCCTTCATCCCTACCGAAACCAACCTCCCGGACGCGCAGGTTCACCCCATCGCCGCCTCGTTCCACCTCAGCAAGCCCGATCTCGACAAGCTCGTTGGAAAATCCATCTTCGCTAAGAAGCTCTGCCTCGAAATCTCGATCTACACCGGCCGGAGAGGCACCACTTGCGGCGTCAGCTCCGGGAGACTGCTCGGGAAAGTGTCTGTACCTATAGACCTCGCCGGAGCGGTGAATAAGGCTACGGTGTTCCACAATGGCTGGATTACGGTTGGGAAGGAGGCTAAAGGCTCCTCCGCGCAGTTTCATCTGAATGTGAAGGCTGAACCTGATCCTAGATTCGTTTTTCAGTTCGACGGTGAACCAGAGTGTAGTCCACAAGTTTTCCAGATCCAAGGCAACATTTCTCAACCAGTCTTCACCTGCAAGTTCAGTTTCAGAAACAACAGTGATCGGAATCAACGTTCCAGATCGTTACAGTCAGAAGCGGGTGGTTCCCGGAGTTGGTTAAGCTCGTTCGGAAGCGAACGCGAGCGGCCGGGGAAGGAACGCAAGGGATGGTCCATAACGGTTCACGATCTCTCCGGCTCACCGGTGGCTGCAGCGTCCATGGTTACACCCTTCGTTGCTTCACCCGGTTCGGACCGGGTGAGCTGCTCCAACCCTGGTTCGTGGCTAATTCTTCGACCGGGTGATGGCACGTGGAAGCCATGGGGGAGGCTCGAGGCGTGGCGCGAACGCGGCGGTTCCGATGGGCTTGGTTACCGGTTTGAGCTTATACCAGACACCAGCGCCGCCGGCATTGTGCTAGCAGAGTCCACGCTGAGCTTGAACAAAGGAGGGAAGTTCGTGATTGATATGAGCAGCCACCGCGGTAGCGGTGGCGGCGGAGGTGGTGGATCTAACGGCCGTGCCACGCCGGGGAGCGCGACGTCGCCGGCGTGCAGCCCGAGGGGTAGTGGAGATTACGGTTACGGGCTTTGGCCTTATTGCATGTACAGAGGATTTGTGATGTCTTCCAGCGTGGAGGGTGAGGGAAGGTGCAGTAAGCCCACGGTGGAAGTGAGCGTGCCGCACGTGAATTGCACGGAGGATGCGGCGGCGTTCGTGGCGTTAGCCGCGGCGGTTGATCTGAGTGTGGACGCTTGCCGCCTCTTCTCACAGCGGCTGAGGAAGGAGCTTTGCCAGCAGATGGATTTACTTGGCTAA 1362 0.5815 MDPCPFVCLTVGNLALKIPVASKPARSVVHPSSSPCFCKIKLKHFPPQSALVPFIPTETNLPDAQVHPIAASFHLSKPDLDKLVGKSIFAKKLCLEISIYTGRRGTTCGVSSGRLLGKVSVPIDLAGAVNKATVFHNGWITVGKEAKGSSAQFHLNVKAEPDPRFVFQFDGEPECSPQVFQIQGNISQPVFTCKFSFRNNSDRNQRSRSLQSEAGGSRSWLSSFGSERERPGKERKGWSITVHDLSGSPVAAASMVTPFVASPGSDRVSCSNPGSWLILRPGDGTWKPWGRLEAWRERGGSDGLGYRFELIPDTSAAGIVLAESTLSLNKGGKFVIDMSSHRGSGGGGGGGSNGRATPGSATSPACSPRGSGDYGYGLWPYCMYRGFVMSSSVEGEGRCSKPTVEVSVPHVNCTEDAAAFVALAAAVDLSVDACRLFSQRLRKELCQQMDLLG* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3664 453 MobiDBLite consensus disorder prediction 202 236 - -
Lja1g3664 453 MobiDBLite consensus disorder prediction 339 367 - -
Lja1g3664 453 PANTHER OS08G0163500 PROTEIN 1 450 IPR010410 -
Lja1g3664 453 MobiDBLite consensus disorder prediction 202 224 - -
Lja1g3664 453 Pfam Protein of unknown function (DUF1005) 1 446 IPR010410 -
Lja1g3664 453 PANTHER OS07G0133500 PROTEIN 1 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3664 Lja-Chr1 45743592 45746053 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3664 - - gmx:100805268 808.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3664 1 45743592 45746053 Lja1g3664 1 45743592 45746053 ECH