Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3663 ATGAGGATGAGAGAGGACGTTACTTGTAGAAACGTTGATGGCGGTGGTGAGAAACTAGAAGATGAAGTAGTAGAGGAGTGTCCGCTGGTGAATGCTGGTTTTTCTTCGCCTAAGAGACTGGTTGTGGTTGGTTACGCTCTTACTTCCAAGAAGATTAAGAGCTTTTTACAGCCCAAGCTTGAAGGTTTAGCTAGGAACAAGGGGATACTGTTTGTAGCTATTGACCATAATAGGCCTCTTTCAGACCAAGGTCCTTTTGATATAGTGTTGCATAAGTTATCGGGGAAAGAGTGGCGCCAAGTTCTTGAGGATTATAGGCAATCACACCCAGAAGTCACTGTCTTGGATCCTCCAGATGCCATACTATGTTTGCGCAATCGTCAATACATGCTTCAAGCTGTTGCAGATATGGACCTTTCTGATTCCTATGGTAAAGTTGGTGTTCCTCGGCAATTAGTTATCAAGAGAGATGCTTCTGCCATACCAGAGTTGGTCAACAGAGCTGGCTTAACTTTACCCCTTGTTGCAAAGCCACTGGTTGCTGATGGAAGTGCCAAGTCCCATGAACTATCCCTTTGTTATGAGCAATACTCCCTTCAAAAACTTGAACCTCCTCTTGTTCTTCAGGAGTTTGTCAATCATGGTGGTGTTCTCTTTAAGGTTTATATAGTTGGTGATGCTATAAAGGTAGTCAGACGGTTTTCCTTACCTGATGTTAGCAAGTGGGAGCTCTCCAATGATGCTGGCATATATAATTTTCCAAGGGTTTCTTGTGCTGCAGCCTCTGCAGATGACGCAGATCTGGACCCCAATATAGCTGAGCTTCCTCCGAGACCCTTACTTGAGAAACTGGCCAAAGAACTTAGATGGCGATTGGGTCTTCGGCTATTCAACTTGGATATTATCCGTGAATATGGGACTAGAGATCGCTTCTATGTCATTGACATTAACTACTTCCCTGGATACGGCAAAATGCCAGAATATGAACACATATTTACAGACTTCTTGTTGAGCCTGGGGCAGGGGAAGTATAAGAAAAAATCAGGCTAA 1050 0.4381 MRMREDVTCRNVDGGGEKLEDEVVEECPLVNAGFSSPKRLVVVGYALTSKKIKSFLQPKLEGLARNKGILFVAIDHNRPLSDQGPFDIVLHKLSGKEWRQVLEDYRQSHPEVTVLDPPDAILCLRNRQYMLQAVADMDLSDSYGKVGVPRQLVIKRDASAIPELVNRAGLTLPLVAKPLVADGSAKSHELSLCYEQYSLQKLEPPLVLQEFVNHGGVLFKVYIVGDAIKVVRRFSLPDVSKWELSNDAGIYNFPRVSCAAASADDADLDPNIAELPPRPLLEKLAKELRWRLGLRLFNLDIIREYGTRDRFYVIDINYFPGYGKMPEYEHIFTDFLLSLGQGKYKKKSG* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3663 349 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 341 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lja1g3663 349 PIRSF ITPK 16 349 IPR008656 GO:0000287|GO:0005524|GO:0032957|GO:0047325|GO:0052725|GO:0052726
Lja1g3663 349 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain 141 337 IPR040464 -
Lja1g3663 349 Pfam Inositol 1,3,4-trisphosphate 5/6-kinase pre-ATP-grasp domain 42 121 IPR041429 -
Lja1g3663 349 PANTHER INOSITOL-TETRAKISPHOSPHATE 1-KINASE 1 341 - -
Lja1g3663 349 Gene3D - 117 321 - -
Lja1g3663 349 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 117 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3663 Lja-Chr1 45723155 45727008 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3663 K00913 - gmx:100127409 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3663 1 45723155 45727008 Lja1g3663 1 45723155 45727008 ECH