Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3661 ATGGCTCAAGCTACTGAAGCTTGTTCACCACCTAGAGCAAATTCACTTGATCTTACACCTCCACCACCACCATCACCACCACTCTCACCACCAGCTTCTCCACTGTCTAATCCACTTGTGAACTCATCCTCTGACCACAAAGACGCATGTTCCCGTGACCCATTCATAGTCCACAACGGACATAAATTCAACCTCAGCGCCGTGCCTTCGAGAGTCATGTTCTATCGGAACATGTATTGGGAGGATTTCCAGGGCGAAACCCTGGAATCCCTCCGCTCCGGATTCTTAAAGCGCACCCCAACGCTCCTCCTTGAAGTCGAAGATGACAAATACATCTTCGACTTCACGCGCATGTTGCAGGTTCACGTTGCGTCCAAGTCCTTCAGATCCATTGCCTGGATCGATGAAAGAGGTAAACCTTTCTTCCCCGTAAAGTTTTTCGACCATGATTTCTCTCAAGAAAAAATGGAAGAGGATCATGGTAGGGCTGCTGAGAAGGAAAATAAAAAGATGGAAGAGGATGATGATGATAAAAGTGATAAGAGAAATGAAAAAATGGAAGTGTGTGACGTTTCAGGTTCCAAAACGCAAAGTTTAGGACCGAAGCCGAAATTTCCGAGTACTAAGTTATTGGCGAGTGATGATAAGATGTACAAGTTTGCGAGCAATTTGTTTCTGAAGCACATGACTAAGGTTGATCCTCAAGCTGTTGTGACGAACGTTCATGAATTTAAAGTGATGGGGGAATTTGGAAGAGTTCGTAAGGATGTTCTTGAGAGGCAAATTGAGATCACAGAAGCCAAACGAGGCAAAGCCAATGTTGTTTATGCTTGGTATGCAGCGCCAACATTCCATGTGGCTGGAATTTTGGCTCTTGGGTTTGACCTGCCTGATCACAAAAATTCTGGGATTCAATTACCATCACTTGGAGCTGGAATCTTTTTGGCTGATGTGGAGTCACCCCAATACAGTGCCTTGCAATACCCGGTGCACCAAGATCCTGAGAAGCATGTTGTGCTCTGTCGGGTTGTGCTAGGAAACGTGGAAAAAGTGCATATTGAATCTAATCAAACTAGTCCTTCCCGTGAGGAATTTGATACTGGCTCTGATGATCCTAAGAATCCTAACTGGTATGTGCTGCAAAACCACAGGCATAGTTCCTGTGGAATGGAAAATATTCTTCTGTGA 1188 0.4495 MAQATEACSPPRANSLDLTPPPPPSPPLSPPASPLSNPLVNSSSDHKDACSRDPFIVHNGHKFNLSAVPSRVMFYRNMYWEDFQGETLESLRSGFLKRTPTLLLEVEDDKYIFDFTRMLQVHVASKSFRSIAWIDERGKPFFPVKFFDHDFSQEKMEEDHGRAAEKENKKMEEDDDDKSDKRNEKMEVCDVSGSKTQSLGPKPKFPSTKLLASDDKMYKFASNLFLKHMTKVDPQAVVTNVHEFKVMGEFGRVRKDVLERQIEITEAKRGKANVVYAWYAAPTFHVAGILALGFDLPDHKNSGIQLPSLGAGIFLADVESPQYSALQYPVHQDPEKHVVLCRVVLGNVEKVHIESNQTSPSREEFDTGSDDPKNPNWYVLQNHRHSSCGMENILL* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3661 395 SUPERFAMILY ADP-ribosylation 211 379 - -
Lja1g3661 395 MobiDBLite consensus disorder prediction 157 206 - -
Lja1g3661 395 Pfam Poly(ADP-ribose) polymerase catalytic domain 259 352 IPR012317 GO:0003950
Lja1g3661 395 MobiDBLite consensus disorder prediction 157 189 - -
Lja1g3661 395 PANTHER INACTIVE POLY [ADP-RIBOSE] POLYMERASE SRO4-RELATED 56 380 IPR044964 -
Lja1g3661 395 ProSiteProfiles PARP catalytic domain profile. 194 395 IPR012317 GO:0003950
Lja1g3661 395 PANTHER OS03G0230300 PROTEIN 56 380 - -
Lja1g3661 395 MobiDBLite consensus disorder prediction 356 370 - -
Lja1g3661 395 MobiDBLite consensus disorder prediction 1 46 - -
Lja1g3661 395 Coils Coil 164 184 - -
Lja1g3661 395 MobiDBLite consensus disorder prediction 15 34 - -
Lja1g3661 395 Gene3D - 208 388 - -
Lja1g3661 395 MobiDBLite consensus disorder prediction 355 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3661 Lja-Chr1 45686509 45688254 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3661 - - cam:101515246 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3661 1 45686509 45688254 Lja1g3661 1 45686509 45688254 ECH