Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3659 ATGAATCCTGATCAGTTTCAGAAGAACAACATGTACATAGAAACCCCTGAAGGTGGCAAAAACTTCGACGATGATGGACGAGACAAAAGAACTGGGACATGGGTGACTGCAAGTGCTCACATCATAACAGCAGTGATAGGGTCAGGAGTGCTGTCACTTGCATGGGCAATTGCTCAGATGGGTTGGGTGGCTGGCCCTGCTGTTCTGCTTGCCTTCTCCTTCATCACTTACTTCACCTCGACTCTTCTTGCCGACTGCTACCGTTCACCGGACCCCGTTCACGGCAAGCGAAACTACACCTATTCCGAGGTTGTCAGAGCTGTCCTAGGAGGAAGGAAATTTCAACTATGTGGATTAGCTCAGTATGTAAATCTTGTCGGTGTGACAATCGGCTACACAATAACTGCTTCAATTAGTATTGTGGCGGTGAAAAGGTCGAATTGTTTTCACAAACATGGTCATCAAGCTAGTTGCGCCATTCAAAATTATCCATTCATGATCCTCTTTGCTTGCATCCAAATCGTCCTTAGCCAGATTCAAAACTTCTCCAAGCTCTCCTGGCTCTCCATTGTTGCAGCTGTGATGTCTTTTGCTTATTCTTCCATTGGCCTCGGCCTCTCCATAGCCAAAGTAGCAGGCGGGGGACATGTTAGAACATCCTTAACGGGGGTGGAAGTTGGGGTTGATGTGACAGGACCCGAGAAGGTGTGGAGGACTTTCCAAGCTATTGGTGACATTGCCTTCGCTTATGCTTATTCTAATGTCCTCATTGAGATTCAGGATACCCTGAAATCAAGCCCTCCAGAGAACAAAGTGATGAAAAGAGCAAGTTTGATTGGCATCTTGACCACAACCATGTTTTACATGCTATGTGGTATCTTGGGTTATGCAGCATTTGGAAACGATGCACCAGGAAATTTCCTCACTGGGTTCGGTTTCTACGAGCCCTTTTGGCTAATAGACTTTGCCAACATTTGCATAGCCATTCACTTAATCGGAGCATATCAGGTCTTCTGCCAACCCATATTTGGATTCGTTGAGAAGTGGAGTCAGGGAAAATGGACCAACAGCCAATTTATAAATGGAGAGCATGCTCTGAACATTCCTTTCTGTGGAACCTTCTATGTGAACTTCTTCAGGGTAGTGTGGAGAACCACCTATGTTATCATCACTGCTCTGATAGCTATGGTATTCCCATTCTTCAATGACTTCCTGGGCCTGATTGGTTCACTCTCCTTCTGGCCATTAACTGTTTATTTCCCCATAGAGATGTACATTAAGCAGTCCAAGATGAAAAAATATTCCTTCACCTGGACATGGCTCAAGATATTGAGCTGGGCTTGCCTCATAGTTTCTATCATCGCAGCTGCTGGTTCCATCCAAGGTCTCTCTCAAAGTCTCAAGAAATACCAGCCATTCAAAGCTCAGCAATAA 1434 0.4533 MNPDQFQKNNMYIETPEGGKNFDDDGRDKRTGTWVTASAHIITAVIGSGVLSLAWAIAQMGWVAGPAVLLAFSFITYFTSTLLADCYRSPDPVHGKRNYTYSEVVRAVLGGRKFQLCGLAQYVNLVGVTIGYTITASISIVAVKRSNCFHKHGHQASCAIQNYPFMILFACIQIVLSQIQNFSKLSWLSIVAAVMSFAYSSIGLGLSIAKVAGGGHVRTSLTGVEVGVDVTGPEKVWRTFQAIGDIAFAYAYSNVLIEIQDTLKSSPPENKVMKRASLIGILTTTMFYMLCGILGYAAFGNDAPGNFLTGFGFYEPFWLIDFANICIAIHLIGAYQVFCQPIFGFVEKWSQGKWTNSQFINGEHALNIPFCGTFYVNFFRVVWRTTYVIITALIAMVFPFFNDFLGLIGSLSFWPLTVYFPIEMYIKQSKMKKYSFTWTWLKILSWACLIVSIIAAAGSIQGLSQSLKKYQPFKAQQ* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3659 477 MobiDBLite consensus disorder prediction 1 27 - -
Lja1g3659 477 Pfam Transmembrane amino acid transporter protein 30 463 IPR013057 -
Lja1g3659 477 PANTHER OS05G0424000 PROTEIN-RELATED 17 471 - -
Lja1g3659 477 PANTHER AMINO ACID TRANSPORTER, TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN-RELATED 17 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3659 Lja-Chr1 45660693 45665450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3659 7 475 Organic Solute Cotransporters AT5G49630 76.151 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3659 K24917 - gmx:100777963 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3659 1 45660693 45665450 Lja1g3659 1 45660693 45665450 ECH