Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3658 ATGCCTCGCTCTGTTAAGGTTAAGCCGGTGGTTATGTTGGATACTGTACAGGAGATTGGTGTATATGTTCATAGGTTTCACAATCTTGATCTCTTTAAGCAGGGATGGTATCGGATTAAGATTACTGTGAGATGGGAGGACAGTGAAAATCTCTCTTTTGGAATTCCTGCTAGAGTTGTTCAATATGAAGCTCCTGACCTGGATCAACGCAATATATATGGTGTATGGAAGATTGATGATACTGATAATAGTTTCTCATCACAGACCTTTCGGATAAAATATGCTAGGCAGGATGTTCATTTATGTATGATGGTCTCATTCATCTTACCTCGTAGTAGATTTGCGGATTTACCTTCAACTGCTGTTATTTTAAAGTTTGAGCTTCTTTATGCTCCTACACTTGAGAATGGAACCGATGTGCAAGCTTCTTTAGATGATTCCCCTGCGGCTATCCATGAATTTCGAATACCTCCTAAAGCTCTTTTAGGACTGCATTCGTATTGTCCCGTCTATTTTGATGCTTTACATGCAGTGCTTGTTGATGTGAGTGTACATGTTAGTCTACTAAAAGCTGCCTCTTTCTCATCTGCATCGAAGGGATTTGATAGAGCAGCTTCCCAAGATGTGAAAGATATTTTGCTTGTTAAAGCATTATTGGCTTCTCGTAGTATATTGCTTGAAGAACTACAAAAAATTAGCAAAGGAGTTGGTGAGCCAGTGGATATATTGGAGTTTATGTCAAAAATGAACCATAAGAACATACTAAAGTTTATGGTGCATGCGAATCAATATGCAATGATTGAGGAAGTTTTAGGACAAGGCAAGCCACACAATGGTCTTGAGGGAGGAAATGGTTCTCTGAATGTTCTACATGTTTCAAAGTTCCATTCCCTGTCTCAGAGTGAACTTTCAGACTGCTTTCATTCAGTGGGAGATCAATTGTTCTATTTATGGAACATATTTTTGAAGTTCCATAGGGATAACATGACAAAGGTTGTTGAATTTTTACGTGACGTATGGGCTAAAGATCGAAAAGTTGAGTGGTCAATATGGATGGTATATTCTAAGGTAGAGATGCCTCATCATTATATAAATAGTGGGAATGACGAGTCCTCCCGTCGAGGTGGTAGTATGCACAAAAGAGTTTCCAGTTTGTGGAAGTTACCAGATGAGCCTCTTGAGACCGCAGCTACATGTGCCGAACATCGTCGAAGAAGCATTGCACAAATGCGGATAAACAACAGTTCAATACAAGACATGCAGATATATGGAGATCCTTTGCGTATACCGGTGGTGATTGTTGAAAGAGTGATGAATGTACCACGTCGCAGTACCAGTGAAATGTCATTCCTAGGACATTTCGACTTTGTAGATTCACATTACTTGCCAACTGGCTCCATCCCTGATGCTGGAGGCAAGAAATCTACACCTCGAAGTAATACTCGAGTATTGAAGATTGTGGTCTTTGTGCATGGGTTTCAGGGGCATCATCTGGATCTAAGACTTGTGAGGAATCAATGGCTTTTGATCGATCCCAAAGTAGAAGTTCTTATGTCTGATGCTAATGAAGATAAAACCTCTGGAGACTTCAGAGAAATGGGAAACAGGCTAGCTCAAGAAGTTGTTTGTTTTATCAAAAGTAAGATGGACAAAGCAACAAGATATGGGGAATTGGGAGATATTAAGCTAAGTTTTGTTGGACATTCTATTGGTAACCTCATTTTGAGAACAGCCATAGCAGATAGCATGATGGAGCCATATCTAAGATTCCTACATACATATATTTCAGTATCTGGCCCACACTTGGGATATCTTTATAGTTCAAACTCATTGTTTAATTCTGGATTGTGGTTTTTGAAGAAGCTAAAAGGCACACAATGCATTCATCAGCTCACCTTCACAGATGATCCAGATTTCCAAAATACTTTCATTTATAAACTGTGTAAGCAGAAGACCTTGGAACATTTTAGGAATATTATTTTGATATCTTCCCCTCAGGATGGTTATGTGCCTTACCATTCTGCCAGAATTGAATCATGTCAAGCTGCTTCCCGTGACACTTCAAAGAAGGGTAAATTGTTTCTAGAGATGCTGAATGATTGTTTGGACCAAATCCGAGCCAACCCCTCTGAACATCGAGTTTTCATGCGCTGTGATGTCAACTTTGATGCCTCAGCTTATGGAAAGAATCTGAACTCTTACATTGGTCGGGCTGCGCATGTTGAATTTCTGGACACAGACATTTTTGCAAAGTTCATAATGTGGTCTTTTCCAGAACTATTTCAATAG 2289 0.3958 MPRSVKVKPVVMLDTVQEIGVYVHRFHNLDLFKQGWYRIKITVRWEDSENLSFGIPARVVQYEAPDLDQRNIYGVWKIDDTDNSFSSQTFRIKYARQDVHLCMMVSFILPRSRFADLPSTAVILKFELLYAPTLENGTDVQASLDDSPAAIHEFRIPPKALLGLHSYCPVYFDALHAVLVDVSVHVSLLKAASFSSASKGFDRAASQDVKDILLVKALLASRSILLEELQKISKGVGEPVDILEFMSKMNHKNILKFMVHANQYAMIEEVLGQGKPHNGLEGGNGSLNVLHVSKFHSLSQSELSDCFHSVGDQLFYLWNIFLKFHRDNMTKVVEFLRDVWAKDRKVEWSIWMVYSKVEMPHHYINSGNDESSRRGGSMHKRVSSLWKLPDEPLETAATCAEHRRRSIAQMRINNSSIQDMQIYGDPLRIPVVIVERVMNVPRRSTSEMSFLGHFDFVDSHYLPTGSIPDAGGKKSTPRSNTRVLKIVVFVHGFQGHHLDLRLVRNQWLLIDPKVEVLMSDANEDKTSGDFREMGNRLAQEVVCFIKSKMDKATRYGELGDIKLSFVGHSIGNLILRTAIADSMMEPYLRFLHTYISVSGPHLGYLYSSNSLFNSGLWFLKKLKGTQCIHQLTFTDDPDFQNTFIYKLCKQKTLEHFRNIILISSPQDGYVPYHSARIESCQAASRDTSKKGKLFLEMLNDCLDQIRANPSEHRVFMRCDVNFDASAYGKNLNSYIGRAAHVEFLDTDIFAKFIMWSFPELFQ* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3658 762 Pfam Putative serine esterase (DUF676) 484 681 IPR007751 -
Lja1g3658 762 Pfam Protein FAM135 124 188 IPR022122 -
Lja1g3658 762 Gene3D alpha/beta hydrolase 485 702 IPR029058 -
Lja1g3658 762 PANTHER UNCHARACTERIZED 7 203 IPR044294 -
Lja1g3658 762 PANTHER UNCHARACTERIZED 199 761 IPR044294 -
Lja1g3658 762 PANTHER ESTERASE FAMILY PROTEIN, PUTATIVE-RELATED 199 761 - -
Lja1g3658 762 PANTHER ESTERASE FAMILY PROTEIN, PUTATIVE-RELATED 7 203 - -
Lja1g3658 762 SUPERFAMILY alpha/beta-Hydrolases 486 678 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3658 Lja-Chr1 45640930 45649172 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3658 - - gmx:100785285 1157.9