Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3646 ATGGAAGGTTGGGACCCGAACACGAAGTCGACGCTGACACAAATCCCTTTGCTGACAACAAAGGCGGGTCCTCGCGACGGAACAGCATGGACGCAGCGGCTGAAGGAGGAGTACAAGTCTCTCATCGCCTACACCCAGATGAACAAATCCAACGACAACGATTGGTTCCGGATCTCCGCCGCCAACCCTGAAGGTACCCGCTGGACTGGGAAATGCTGGTATGTGTACAACCTTCTCAAGTATGAATTCGACCTCCAATTTGATATCCCTGTTACGTACCCTTCCACCGCGCCGGAGCTCGAGCTTCCTCAATTGGATGGCAAGACCCAGAAGATGTACAGGGGAGGGAAGATATGCTTGACCGTGCACTTCAAGCCTCTTTGGGCCAAAAATTGCCCTAGATTTGGTATAGCTCATGCACTTTGCTTAGGCCTTGCACCATGGCTTGCGGCAGAGGTTCCCATTCTTGTGGATTCTGGTATGATCAAGCATAAAGACGATGCAGCCACATCAGCTGAATCTTAG 525 0.5181 MEGWDPNTKSTLTQIPLLTTKAGPRDGTAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISAANPEGTRWTGKCWYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDAATSAES* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3646 174 SUPERFAMILY UBC-like 5 164 IPR016135 -
Lja1g3646 174 PIRSF Ufc1 3 168 IPR014806 GO:0061657|GO:0071569
Lja1g3646 174 Pfam Ubiquitin-fold modifier-conjugating enzyme 1 8 163 IPR014806 GO:0061657|GO:0071569
Lja1g3646 174 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 5 173 - -
Lja1g3646 174 PANTHER UBIQUITIN-FOLD MODIFIER-CONJUGATING ENZYME 1 5 173 IPR014806 GO:0061657|GO:0071569
Lja1g3646 174 Gene3D Ubiquitin Conjugating Enzyme 1 170 IPR016135 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3646 K12165 - jre:108981889 362.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3646 1 45336218 45338126 Lja1g3646 1 45336218 45338126 ECH