Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3639 ATGAGCATCATCACGCACCCAATTTTGTTGAATTCCGCTTTTGTCCCCACTCCTCCCATTTCAGTTTCAGTTTCAGATCCTCGCCGCGCTTCTCAACGGTTTCCTCCGCATTTTCTCTGCTTCTCTTCTCTCTCAGCCTCACCCTCAGATATGGATGCTAATGTGAGCCAAGGTCTTTACCCGCTGCACCGTTCTAAAACTCTTCACCTGGTTAGACATGCCCAAGGGTTTCACAATGTAGCAGGAGAAAAGGACCCAGAGGCATACTTGTCTTATGATTATTTGGATGCAAGCCTAACCCCTCTGGGCTGGAATCAGGTTGATAATCTGCGAGAGCATGTTAAGTCAAGTGGTCTATCCAAAGGAATCGAACTAGTGATTACTTCACCCTTGACAAGGACCATGCAAACAGCAGTAGGAGTCTTTGGTGGTGAAGCATCCACTGATGGGATTGACTCCCCTCCTCTGATGATTGACAATGCGGGGGATAGTGCTCGTCCTGCAATTTCTAGTTTGAATTCACCACCATTTTTAGCAGTAGAGCTTTGCCGAGAGCATTTGGGGGTGCATCCTTGTGATAAGAGAAGAAGCATCACAGAATATCGTAATATATTTCCAGCAATTGATTTTTCACTGATAGAAATTGATGAGGACATTTTGTGGAAACCTGACGTTAGAGAAAAGAATGAAGAAGTTGCTGCCAGGGGACTGAGATTTTTGGAATGGTTGTGGACACGTAAAGAAAAGGAGATTGCTGTTGTTTCCCACAGTGGTTTTCTTTTTCATGCCCTCAGTGCTTTTGGAAACGATTGTCATCCAACTGTGAAGAATGAAATCTGCACACACTTTGCTAATTGTGAGCTGCGTTCAATGGTTATCGTTGATAGAGGTCTGATTGGATCAGATGATCCCTCTTCCAATTATCCTGGCAAAATTCCACATGGCCTTGACCTGCCTAGTGATATTGCTGACGAGAAACTTGTGGCGAATGGCCCTGCAAATTAA 1005 0.4468 MSIITHPILLNSAFVPTPPISVSVSDPRRASQRFPPHFLCFSSLSASPSDMDANVSQGLYPLHRSKTLHLVRHAQGFHNVAGEKDPEAYLSYDYLDASLTPLGWNQVDNLREHVKSSGLSKGIELVITSPLTRTMQTAVGVFGGEASTDGIDSPPLMIDNAGDSARPAISSLNSPPFLAVELCREHLGVHPCDKRRSITEYRNIFPAIDFSLIEIDEDILWKPDVREKNEEVAARGLRFLEWLWTRKEKEIAVVSHSGFLFHALSAFGNDCHPTVKNEICTHFANCELRSMVIVDRGLIGSDDPSSNYPGKIPHGLDLPSDIADEKLVANGPAN* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3639 334 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 48 324 - -
Lja1g3639 334 SUPERFAMILY Phosphoglycerate mutase-like 66 296 IPR029033 -
Lja1g3639 334 Gene3D - 65 308 IPR029033 -
Lja1g3639 334 Pfam Histidine phosphatase superfamily (branch 1) 68 140 IPR013078 -
Lja1g3639 334 PANTHER PHOSPHOGLYCERATE MUTASE FAMILY PROTEIN 48 324 - -
Lja1g3639 334 SMART PGAM_5 67 263 IPR013078 -
Lja1g3639 334 CDD HP_PGM_like 67 138 IPR013078 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3639 Lja-Chr1 45221147 45227790 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3639 - - cam:101489637 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3639 1 45221147 45227790 Lja1g3639 1 45221147 45227790 ECH