Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3636 ATGGCCTCCATGGAGGACGAAGAGAAGAGAATAACAGAAAAGTACACCGCGGCGGCGGAGGAGTTGGAGGTTTCGCCGATCGAGGAGGTTCGGCTGGCGGTTCCGAACGACGACGATCCGAGCCTCCCGGTATGGACGTTCCGGATGTGGTTTCTGGGGATTATATCAGTGGTGTTGCTGTCGTTCATGAACACGTTCTTCAGTTACCGGAAGCAGCCGCTGACGGTGACGATGATCTCGGTTCAGGTGGCGACGCTTCCGATCGGGCGGTTCATGGCGCGAGTGCTTCCGACGAGGCGGTTTCGGTTGTTTGGTAAGGAGTTTTCACTGAATCCTGGTCCGTTCAACGTGAAGGAGCATGTGTTGATCTCGATTTTCGCCAATGCGGGTTCCGCGTTTGGTAACGGCGCTGCGTATGCGTTGAGTATTGTGGATATCATCCGTGCCTTTTATGGAAGGAGGATCACGTTCTTAGCAAGCTGGCTTCTCATTATCACAACGCAGGTATTGGGGTATGGATGGGCGGGGATAATGAGGAAGTACGTGGTGGATCCGGCGGAGATGTGGTGGCCGGCCACTCTCATGCAGGTCTCTTTGTTCAGGACTATGCATGAAAAAGACAACAAACGCATGTCCAGAGAGAAGTTCTTTCTGATTGCTCTTCTTTGCAGCTTTGCCTGGGCGGTGGTGCCCGGTTACCTCTTCGGCACTCTAACAGCTATTTCTGTTGTTTGCTGGATATTTCCTAGATCAGTAACAGCCCATCAAATTGGATCCGGGTTAAAGGGACTAGGTTTGGGTTCCTTTGCACTTGACTGGAGCACCATTGCTGGATTCAATGGAAATCCACTGGTTGTTCCATTCTTTGCCGTCGCAAACATCATCGTTGGCTACATTGTGTTAATCTACTTGGTCATCCCTGGCTCATACTGGGGACTTAATCTCTATAATGCCAAGAATTTCCCTATTTTCTCCTCAAAGCTCTTCACTGCTCAAGGTCAAGATTACAATGTCACTGCCATTGTCAATGACAAGTTTGAGATTGACATGCAGGCTTACCAGGAACGAGGTCGAATCAGCCTAAGTGTGTTCTTTGCTATTAGTTATGGTATTGGCTTTGCTGGCGTTATCTCTACCCTCACTCACGTTGCCTTGTTCAATGGGAGGGAGATATATCAACAATTCAAATCTTCCCAATCTGGAAAGGTAGACGTTCACACAAGATTGATGAGGAAGTACAAGGACATTCCTAATTGGTGGTTTCATGGCTCGCTAGTGGTATCATTTCTAGTTGCACTTGCAATGTGTATTTTCTTGAGAGATGAGGTGCAAATGCCATGGTGGGGTCTCTTCTTTTCAGCTGGGCTTGCATTAATTTTTACTCTACCCATTAGCATCATTACAGCCACTACTAATCAGACTCCAGGTTTAAATATCATTACTGAGTACATCATGGGGGTTATTTTACCTGGCAAACCAATAGCCAATGTTTGCTTCAAGACCTATGGTTACATGAGCATGACTCAGGCTATTTCCTTTCTTTCTGATTTCAAGCTGGGACATTACATGAAGGTCCCGCCACGGTCAATGTTCATAGTCCAGATTCTAGGGACTGTGATAGCTGGAACAGTCAATCTTGTTGTGGGATGGTGGTTGCTTGGTTCAATCAAAAACATATGCCACGAAGAACTGCTGCCCACGAACAGTCCATGGACTTGTCCTGGTGACAATGTCTTCTTTGATGCATCCGTGATTTGGGGATTGGTTGGCCCAAAAAGAATTTTCGGCTCACTTGGCAACTACGGAAAACTCAACTGGTTCTTCCTCATTGGAGCATTGGGACCATTCATTGTGTGGCTCCTCCATAGAGTATTTCCCAGTCAAAAATGGATTTCCTTCATTCACATTCCTGTAATTCTCGGAGCAACTGGGAGCATGCCACCAAGCAGCACAGTGAACTTCAATTCATGGATCATTGTTGCCACAATCTTCAACTATTTTGTATTCAAGTATCGTAAGAACTGGTGGCAGAGGTATAACTATGTGCTTGCAGCAGCTTTGGATGCTGGATTGGCTTTCATGACGATTCTTCTGTATTTTGCACTTAACATGGAGGGAATAGGCTTGGACTGGTGGGGACAAAGTGAGCATTGTGACCTTGCTAAGTGTCCAACTGCTAAAGGGATTGATGTTGGTCAGGGGTGTCCTGTGTTTTGA 2217 0.4687 MASMEDEEKRITEKYTAAAEELEVSPIEEVRLAVPNDDDPSLPVWTFRMWFLGIISVVLLSFMNTFFSYRKQPLTVTMISVQVATLPIGRFMARVLPTRRFRLFGKEFSLNPGPFNVKEHVLISIFANAGSAFGNGAAYALSIVDIIRAFYGRRITFLASWLLIITTQVLGYGWAGIMRKYVVDPAEMWWPATLMQVSLFRTMHEKDNKRMSREKFFLIALLCSFAWAVVPGYLFGTLTAISVVCWIFPRSVTAHQIGSGLKGLGLGSFALDWSTIAGFNGNPLVVPFFAVANIIVGYIVLIYLVIPGSYWGLNLYNAKNFPIFSSKLFTAQGQDYNVTAIVNDKFEIDMQAYQERGRISLSVFFAISYGIGFAGVISTLTHVALFNGREIYQQFKSSQSGKVDVHTRLMRKYKDIPNWWFHGSLVVSFLVALAMCIFLRDEVQMPWWGLFFSAGLALIFTLPISIITATTNQTPGLNIITEYIMGVILPGKPIANVCFKTYGYMSMTQAISFLSDFKLGHYMKVPPRSMFIVQILGTVIAGTVNLVVGWWLLGSIKNICHEELLPTNSPWTCPGDNVFFDASVIWGLVGPKRIFGSLGNYGKLNWFFLIGALGPFIVWLLHRVFPSQKWISFIHIPVILGATGSMPPSSTVNFNSWIIVATIFNYFVFKYRKNWWQRYNYVLAAALDAGLAFMTILLYFALNMEGIGLDWWGQSEHCDLAKCPTAKGIDVGQGCPVF* 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3636 738 PANTHER OLIGOPEPTIDE TRANSPORTER 2 12 736 - -
Lja1g3636 738 PANTHER ISP4 LIKE PROTEIN 12 736 IPR004648 GO:0055085
Lja1g3636 738 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 24 705 IPR004648 GO:0055085
Lja1g3636 738 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 28 703 IPR004813 GO:0035673
Lja1g3636 738 Coils Coil 1 21 - -
Lja1g3636 738 Pfam OPT oligopeptide transporter protein 45 701 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3636 Lja-Chr1 45154025 45159405 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3636 17 737 Organic Solute Cotransporters AT5G64410 69.093 0.0 1091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3636 - - gmx:100785973 1176.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3636 1 45154025 45159405 Lja1g3636 1 45154025 45159405 ECH